Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01957 ATGGCTTCTTCTACTGGTAGTTTAGACACCTCTGCAACTGCAAACTCCTTCGCCAACTTCACCTTCGCCACACACCCCTTCATGACCACTTCTTTCTCTGACCTCCTTGCTTCTCCCACAGACAACAACAATAACAACAACAAGTCTCAGGGTGCTTTCTCTGAAAAAAATGCCTCTGGTGTGCCCAAATTCAAGTCCACTCCACCTCCTTCTTTGCCTCTCTCCCCTCCTCCCATTTCTCCTTCTTCATACTTTGCTATTCCACCTGGTTTGAGTCCTGCTGAGCTTCTTGACTCTCCGGTTCTCCTTAACTCTTCTAACATACTGCCATCTCCAACAACCGGAGCATTTGTTTCTCAGAGCTTCAATTGGAAGAGCAGTTCAGGGGGAAACCAGCAAATTGTCAAAGAAGAAGACAAAAGCTTCTCAAATTTCTCTTTCCAGACCCAGGCGAGGCCTCCTGCTTCATCCACAGTAACATATCAATCTTCAAATGTTGCACTTCAAGCACAAAATCCATGGAATTTTCAGGAGAGCACAAAGCAAGATAGTTTTTCTTCAGGGAAGAGTGTGATGAAAACCGAAAACTCTTCTTCCATGCATAGTTTTGCCCCTGAGATTGTTAGTGTGCAGACTAACCATAGCAATGGATTTCAATCTGATTTTGGAAATTATCCCGCACAATCTCAGACCCTAAACAGAAAGTCAGATGACGGATACAATTGGAGGAAGTATGGCCAAAAACAAGTGAAAGGGAGTGAGAATCCAAGAAGTTATTACAAATGCACATACCCCAGTTGCCCCACGAAGAAGAAGGTTGAGAGGTCTTTAGATGGACAAATTACTGAGATAGTTTATAAGGGTACTCATAACCATCCCAAGCCTCAATCTACCAGGAGAAACTCATCATCTTCCTCTTCTCTTGCAATCCCTCCTTCAAATCCCATCAGCAATGAAATCCAAGATCAATCATATGCTACTCATGGCAGTGGACAAATGGATTCCGCAGCCACCCCAGATAACTCATCAATATCAATAGGAGATGATGACTTTGAGCAGAGTTCTCAAAAGTGTAAATCAGGTGGAGATGAATACGATGAAGATGAACCTGATGCAAAAAGATGGAAAATTGAAGGAGAAAATGAGGGTATGTCAGCGCCTGGTAGTAGAACAGTAAGAGAACCTAGAGTTGTGGTTCAGACAACCAGTGACATTGATATCCTAGACGATGGATACAGATGGAGAAAATATGGGCAGAAAGTAGTAAAGGGCAATCCAAATCCAAGGAGTTACTACAAGTGCACACACCCAGGATGTCCAGTGAGAAAGCACGTGGAACGAGCCTCACATGACCTCAGAGCTGTGATCACAACCTATGAGGGAAAGCACAACCATGATGTCCCTGCAGCCCGTGGCAGTGGCAGCCATTCTGTTAACAGACCCCTGCCAAACAATGCTGCAAACCCCACCACTGCAATAAGGCCATTGTCAGTGAACCATCACACTGACAACAACTCCATTCAAAACCAAAGGCCACAAGCACCACCATCAGGGCAATCACCCTTCACCCTAGAGATGCTACAAAGTCCAGGAAACTTTGGATTCTCAGGTTTTGGAAATTCAATGGGCTCTTACATGAACCAGCAACAATTATCTGACAATGTTTTTTCCTCCAGAACCAAGGAGGAGCCCAGAGATGACATGTTCCTTGAGTCTCTACTATGCTGA 1728 0.445 MASSTGSLDTSATANSFANFTFATHPFMTTSFSDLLASPTDNNNNNNKSQGAFSEKNASGVPKFKSTPPPSLPLSPPPISPSSYFAIPPGLSPAELLDSPVLLNSSNILPSPTTGAFVSQSFNWKSSSGGNQQIVKEEDKSFSNFSFQTQARPPASSTVTYQSSNVALQAQNPWNFQESTKQDSFSSGKSVMKTENSSSMHSFAPEIVSVQTNHSNGFQSDFGNYPAQSQTLNRKSDDGYNWRKYGQKQVKGSENPRSYYKCTYPSCPTKKKVERSLDGQITEIVYKGTHNHPKPQSTRRNSSSSSSLAIPPSNPISNEIQDQSYATHGSGQMDSAATPDNSSISIGDDDFEQSSQKCKSGGDEYDEDEPDAKRWKIEGENEGMSAPGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGSHSVNRPLPNNAANPTTAIRPLSVNHHTDNNSIQNQRPQAPPSGQSPFTLEMLQSPGNFGFSGFGNSMGSYMNQQQLSDNVFSSRTKEEPRDDMFLESLLC 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01957 575 FunFam WRKY transcription factor 33 395 461 - -
Viun8g01957 575 MobiDBLite consensus disorder prediction 178 199 - -
Viun8g01957 575 Gene3D WRKY domain 223 296 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun8g01957 575 MobiDBLite consensus disorder prediction 219 241 - -
Viun8g01957 575 MobiDBLite consensus disorder prediction 219 236 - -
Viun8g01957 575 ProSiteProfiles WRKY domain profile. 237 295 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun8g01957 575 SUPERFAMILY WRKY DNA-binding domain 235 295 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun8g01957 575 FunFam WRKY transcription factor 227 296 - -
Viun8g01957 575 Gene3D WRKY domain 395 461 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun8g01957 575 SMART WRKY_cls 236 294 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun8g01957 575 SMART WRKY_cls 408 467 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun8g01957 575 Pfam WRKY DNA -binding domain 409 465 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun8g01957 575 Pfam WRKY DNA -binding domain 237 293 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun8g01957 575 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 97 501 IPR044810 GO:0003700
Viun8g01957 575 MobiDBLite consensus disorder prediction 352 380 - -
Viun8g01957 575 MobiDBLite consensus disorder prediction 38 56 - -
Viun8g01957 575 MobiDBLite consensus disorder prediction 286 392 - -
Viun8g01957 575 MobiDBLite consensus disorder prediction 291 351 - -
Viun8g01957 575 MobiDBLite consensus disorder prediction 38 76 - -
Viun8g01957 575 ProSiteProfiles WRKY domain profile. 403 468 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun8g01957 575 MobiDBLite consensus disorder prediction 459 520 - -
Viun8g01957 575 SUPERFAMILY WRKY DNA-binding domain 400 468 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun8g01957 575 MobiDBLite consensus disorder prediction 477 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01957 Viun-Chr8 30098939 30102140 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01957 234 574 WRKY Transcription Factor Family AT2G38470 55.932 1.46e-112 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun8g01957 WRKY 1.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01957 K13424 - gmx:100127393 976.467