Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01956 ATGGGCGTTAACGAAACTAAATGGGTTTGTGAACATACAACATTGTTTCAAACTAATCCCAAAGGAATATTCTACAACGAAGACCCTTTAAACTACACGTTAACGGTGGTCCTTTTACAGGCCTCCATAGCGTGCTTAGCCTCCTTATTCTTCGAGTTTCTTCTTGTCCCCATTGGGGAGACTACCTTCATTCCACATGTGCTGGCAGGGTTGGTACTGGGACCATCACTTTTGGGGAAAACTTTAAACCTTAAAAAGTTGTTCTCCCCAAAAACTATCTACATAGCTGAGGCACTCTCTCGTTTCGGGGTGATGGTGTTTCTGTTCTTGGTGGGAGTGAAGGTAGATCCACTTTTAATTTTTAGAACAGGGAAAAAGACTTGGGCCATTGGGTTGGGTTCTTGTCTATTGCCACTCGGTTTTAGCGTATGTTCAGCTTATATTATAAGGCTATATTTGTCCCCGGAATCAGAAATCTACAAGGCCTTATATTTTATTTCGACTTTCTCATCAGCTGGTTCCTTTCAAGCCACTGCAAGTGCAGTGCATGATTTTAAGCTCCTAAATTCCGAGGTTGGTCGATTAGCGGTCTCTTCATCTATGATAAATGGAGCGTTCAGTGCGATGTGGCAAGGCATGGTAGTCTCACAGCGTCCAAAAGTTATGCGAAAAAAACCAGACGGATATCTGACATTGGGTATCCTCAGTCTGATTGCACTGGTGCTTATCATAATTTGTATTCTTCGACCTATCATGTTATGGATGACACGCATGACACCCAAAGGGAAACCCGTGAAAGAGTCCTACATAATTTCCATCTATGTCATGATGTTGGGGTGTTCACTCTTTAGTGAGGCCATTGGGGAGCACTACATGCTTGGACCATTGATTTTTGGCCTAGCAGTGCCAGAAGGTCCACCTATTGGAGCAGCATTGGTGGATAGGCTAGATACCCTCATCTCGGGACTGCTTATGCCATTGTTCTTCTTCTCTTCCAGTGCTAGATTCAGTGCCGATATACTTAATTTCACTGACTTCACAATTGTACAACTAGTGGCCTTAGGTAACTTCTTTGCCAAGATTGCAGGAGTCGTGTTACCCTCTCTCTATTGCAAGATGTCATTCACCGATGCAATCTCCTTAGGTCTCATCCTTAGTGCCCAAGGCATATCACAGTTGGTGCACTTGCAAAGTTTACAAACCTTTAAGATTATAGATGATATGATATACTCGCAAATGGCGATAGCTTTAGTATGGTTGACAGCAGCTTCCAGCCCTATAGTCAAATTATTGTATGACCCATCTAAAAGTTACTTGTCTCTAACAAGGTGGAGAACCGTTGAGCATGCTCCTCCCGACATTGAACTCCCCATCATTGCATGCATACACTGTGAGGAAAACACTCCAACCATGATCAATTTTCTAGAAATATCTAACTCTAGAGTTGAAAGTCCCATTTACTTCCATGTTCTACACCTACTTCAACTCAAAGGAAGATCAGCCCCACTTATGATAGATCATGATCTCAAGAGCAACACCCATCTATGGCGCTCTAATCGCTCAGTCAGCATAATAAATGCCTTTAAATCATATGAGCAACAATGCAGTAACGTGCAGGTCAAAGTCTACACATGTATCTCCCCTTATGAGACAATGCACGACGAGGTATGCATGCAGGCTGCAGAGAAAAGAGCATGCATATTAATTGTGCCTTTTCACAGGCACTTTAGAAGAACTGGGATTATAGAATTATCAAACCCCGTCAGAGCATTGAATCGCCATTTGCTGAGAACCGCACCTTGTTCCGTTGGGATCTTAGTTGAACGTGGGAGTTTGGTTAACAACAACCCTCTAACAACTGTATCCTTTTATAATGTTGCAGTTGTATTTATAGAAGGACCAGATGACCGTGAAGCCTTGGCATATGCAATGCGCATGGCAGATCACCCCAATGTAAAAGTCACTGTAATTAGGATAACGGGATCTCGCAGGAAAAGTAGAACTATGATCACCAGAGACCCTGATGCTGAAATAATTCACAAGTTTATGGTTAACTACCTCCAAGTGAAACGCCATGATTTCCGAGAGCAAATTGTGAGAGATAGTGTTGAAATGATTGGCGTGATTAGGGAATTCGATGGTTGCTTTGATTTGATTTTGGTGGGTCGACGCCACGAGAGTGAGTCTTCAATGTTCTATGGAATGAATGAGTGGAATGAGTACCCAGAACTTGGGTCTGTAGCAGACATGTTGGTGTCTTCAGATTCTACCTTTGACGGGTCAGTTTTGGTGGTGCAGCAACAAAATAAAGTAGGGACGCATGTTATTCGTCAAGATTGTCACAATTTAGAAAATTCGGTCCCTAGGCGTGAACTACCAACCGTTTTGGATGTGCAGCCTAAACCATCGGGGTGGCCAATTCTTTAA 2427 0.4289 MGVNETKWVCEHTTLFQTNPKGIFYNEDPLNYTLTVVLLQASIACLASLFFEFLLVPIGETTFIPHVLAGLVLGPSLLGKTLNLKKLFSPKTIYIAEALSRFGVMVFLFLVGVKVDPLLIFRTGKKTWAIGLGSCLLPLGFSVCSAYIIRLYLSPESEIYKALYFISTFSSAGSFQATASAVHDFKLLNSEVGRLAVSSSMINGAFSAMWQGMVVSQRPKVMRKKPDGYLTLGILSLIALVLIIICILRPIMLWMTRMTPKGKPVKESYIISIYVMMLGCSLFSEAIGEHYMLGPLIFGLAVPEGPPIGAALVDRLDTLISGLLMPLFFFSSSARFSADILNFTDFTIVQLVALGNFFAKIAGVVLPSLYCKMSFTDAISLGLILSAQGISQLVHLQSLQTFKIIDDMIYSQMAIALVWLTAASSPIVKLLYDPSKSYLSLTRWRTVEHAPPDIELPIIACIHCEENTPTMINFLEISNSRVESPIYFHVLHLLQLKGRSAPLMIDHDLKSNTHLWRSNRSVSIINAFKSYEQQCSNVQVKVYTCISPYETMHDEVCMQAAEKRACILIVPFHRHFRRTGIIELSNPVRALNRHLLRTAPCSVGILVERGSLVNNNPLTTVSFYNVAVVFIEGPDDREALAYAMRMADHPNVKVTVIRITGSRRKSRTMITRDPDAEIIHKFMVNYLQVKRHDFREQIVRDSVEMIGVIREFDGCFDLILVGRRHESESSMFYGMNEWNEYPELGSVADMLVSSDSTFDGSVLVVQQQNKVGTHVIRQDCHNLENSVPRRELPTVLDVQPKPSGWPIL 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01956 808 CDD USP_Like 625 765 - -
Viun8g01956 808 Pfam Sodium/hydrogen exchanger family 43 423 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Viun8g01956 808 PANTHER CATION/H + ANTIPORTER 20 769 - -
Viun8g01956 808 Gene3D - 486 771 - -
Viun8g01956 808 Gene3D - 35 437 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01956 Viun-Chr8 30092521 30095217 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01956 9 791 Antiporter Super Family AT2G13620 33.537 6.40e-143 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01956 K26731 - gmx:100790969 1025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g01956 8 30092521 30095217 Viun8g01956 8 30092521 30095217 ECH