Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01954 ATGTCATCATCTACAATGCATCTTGTGATGCTAATGCATGTTTGCATTGGTGTTCTTGCTTCAAACAATCTTGTCCAATCTTCAAAATTCTCATCCCTACTTGTTTTTGGAGATTCTACTGTTGATCCTGGTAATAACAATTACCTGCTAACTATTTCTAAGGCTAATTATTTTCCTTATGGCATAGATTTCCCAGGGCATGTACCCACAGGGAGATTCAGCAACGGAAAATTGGTTCCTGATTTTCTTGCCTCTGCCTTGAACATCAAAGACACTGTTCCTCCTTTTCTAAATCCAGACCTAAGTGACCAAGAACTTCTAACAGGAGTTTCTTTTGGCTCGGGACAATCTGGTATTGATGATTTCACTGCATCTCTCACTAATGTTTTATCGATGGACCAACAACTTCAATATTTCAAAGCTTACACAATGAAGCTGAAGCAAATCGTAGGAGAAGATCAAGCCATGCAAAGACTTCATGATGCTCTTGTTCTCATCTCTGTTGGTACTAACGATTTCATTTTGAATTTCCATGACTTCCCCTCTCGACGACTCATGTTCATCACCATCGATGCTTACCAAGATTATTTGCTTGATAAGTTTGAGGTCATCATTAAGGAACTATATGACCAAGGATGTAGGAACATTGGTGTGGCCGGGCTTCCTCCCCTTGGTTGTGTGCCTCTTCAAATGACCCTAAAACTCAAAATTGATAGGCAATGTTTGATGCATCAGAATACTGACAGTGAGAAGTATAATCAGAAGTTGGCTCAGAGACTCTCCCTGTTACAAGCTACACTCCCTCAAAGCAAAATTGTATATGGAGATTTGTATCACCCACTACTTAACCTTTTTACTCATCCTCAACATTATGGTATGGAGGTAACAAACAGAGGGTGTTGTGGATCAGGTTACTTGGAAGTGATTGAGATATGTAATGCATTTACACCTCTATGCAGTAATCACTCAAAGTATGTATTCTGGGACAGTGTTCATTTAACAGAAGCATCTTACAGTTATCTTGCAGACTATCTTATAAGAGTAGCTTTGCCCTTATTCTTCAAATAG 1068 0.3914 MSSSTMHLVMLMHVCIGVLASNNLVQSSKFSSLLVFGDSTVDPGNNNYLLTISKANYFPYGIDFPGHVPTGRFSNGKLVPDFLASALNIKDTVPPFLNPDLSDQELLTGVSFGSGQSGIDDFTASLTNVLSMDQQLQYFKAYTMKLKQIVGEDQAMQRLHDALVLISVGTNDFILNFHDFPSRRLMFITIDAYQDYLLDKFEVIIKELYDQGCRNIGVAGLPPLGCVPLQMTLKLKIDRQCLMHQNTDSEKYNQKLAQRLSLLQATLPQSKIVYGDLYHPLLNLFTHPQHYGMEVTNRGCCGSGYLEVIEICNAFTPLCSNHSKYVFWDSVHLTEASYSYLADYLIRVALPLFFK 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01954 355 PANTHER GDSL ESTERASE/LIPASE EXL3 15 346 - -
Viun8g01954 355 SUPERFAMILY SGNH hydrolase 33 347 - -
Viun8g01954 355 CDD SGNH_plant_lipase_like 32 346 IPR035669 -
Viun8g01954 355 Gene3D SGNH hydrolase 19 350 IPR036514 -
Viun8g01954 355 FunFam GDSL esterase/lipase APG 22 349 - -
Viun8g01954 355 Pfam GDSL-like Lipase/Acylhydrolase 33 345 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01954 Viun-Chr8 30064796 30067013 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01954 30 347 Pollen Coat Proteome AT1G75910 35.625 2.99e-62 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01954 - - aprc:113874434 435.261