Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01953 ATGACTCTCTTTGACAATGGACAATTTCTCAAATCCTTCACTGCCTCTTTGAACTTCTCAAGATTTATAAACCAAACCAAAGGCGCTGCTCTACAGAAATCAAGTTATGTCTATCCGAAATTTCAATCCTCTAGAACAGAAAAGGCTATGCAGATTTCTGGGGTTTATGTCCTGTGTGATTGGACTAATCTGTTATGCGTTGAGTTCCTCTTTCAACCATGTATTTGGAGAGTGGAACTTCTTCAAGATCACCCTTTACACCATGATCTTCTCAATTTCTTCCTTGGATGTCTAACTGTTCAACTTATGGAGATCAATTTGATACTCTTTATCGTTGCTGCTATCTTCTGCTATTGTTTCGGGATTCTTCGTTCTAAAGACTCTAACTCAGAGATTGGAACAGTACCAATGGAAGACCAAGCAACCATAGAACTTGATACCGCAGATGGTGGAGAAAGAGAAGCAGAGGACAACATTGGCCAACAACAAGTTCCGTTGTTAAGAATGGTAGGTGATGGTTACAATTGGAAAAAATACGAAGATAAAGTAGGGAAAGGGAATGAAAATCAAGTAAGTTACTATAAATGCACACACCCCAATTGTTATGTGAAGAAAAAAGTTGGTAGAACTTTAGAGGGGAAAATTGTTGAGATCAATTACCAGGGTACCCATACACACCACAAGCTTATGAATAATATGAAGAGGAACTCTTCATCTGAATATTTGTATTCAGTGGTAACTTCAGAGTCTGTCACCAGTGACTTGCCAGATCAATCATTGGATCAGTATCCAAATGAAATATAA 804 0.3806 MTLFDNGQFLKSFTASLNFSRFINQTKGAALQKSSYVYPKFQSSRTEKAMQISGVYVLCDWTNLLCVEFLFQPCIWRVELLQDHPLHHDLLNFFLGCLTVQLMEINLILFIVAAIFCYCFGILRSKDSNSEIGTVPMEDQATIELDTADGGEREAEDNIGQQQVPLLRMVGDGYNWKKYEDKVGKGNENQVSYYKCTHPNCYVKKKVGRTLEGKIVEINYQGTHTHHKLMNNMKRNSSSEYLYSVVTSESVTSDLPDQSLDQYPNEI 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01953 267 Pfam WRKY DNA -binding domain 172 226 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun8g01953 267 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 158 239 IPR044810 GO:0003700
Viun8g01953 267 Gene3D WRKY domain 160 228 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun8g01953 267 SMART WRKY_cls 170 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun8g01953 267 SUPERFAMILY WRKY DNA-binding domain 168 227 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun8g01953 267 ProSiteProfiles WRKY domain profile. 165 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01953 Viun-Chr8 30063655 30064711 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01953 168 257 WRKY Transcription Factor Family AT2G38470 48.958 5.26e-19 84.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun8g01953 WRKY 1.3e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01953 K13424 - vun:114195090 547.74