Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01952 ATGACAACTTTGGACATCCAACTCACTAGATGGTTGAGGCAAACAGCAGTATGGAGATTTGTAGGTTTTTTTTCAACCGTTGTTGGACTTGTTTGCTATGGTCGCAGCTCCTCTTTCACCCTTGTTTTCGGAGAGTGGAGCTTGTTCAAGATCTTTCTCTACACTGTGTTTAGTCTCTTCCTCTGTTTTTGGAGTCTACTACACGCAAAGGTATGTCCACGCTCAACGTGTCCCCTATTCAAAGCTCACTCAGCACTATTGCTTTTGACCCTCACATCTGTGTATTCCTATTTCACTGATAAAGCTGCGAATGGAAAACCAGATGTATATAGTTTGATTTCCTGTGCTGCGTTTGCTATCATGTCATTCAGCCTCTCCAGGCAAACCCAGTGCGGTTTTGAAGTTGATCTTTTGAATTTTTTCTTGGGATTTCTAATACTGTTACTCATGAAGATTACATTGGCATTAGCTGTTGTTGGAGTAGGTTTCAGCTATGCCCTTATTATTCTTCGTTCATCATTAGATACAACATCATACGAGAATTGTGGAACACAAGATGAACATCCTGTAGTTATTGATATGAATCAAGCTAGAATGATGCAACATCTAGTGGATTGTGCGAAGGCCCTTGGGAAGGACAATTCCAATCTTGCCAACACGCTTTACAAGCATGTAAAGGAATTCGTTGAAGATGATTCTAAACGACAGGTAATCGATCGCAATTTCGTGATCGATGCGCTACCATTGGGAAAAACGAACGACTTTCGTAAAACTATACAGCTGATGATGGGTGTTGGGTTGAGAAAAGAGTGCTGCAAGGTGTACTGTAATTGGCGGAGGGAGAGCTTAAAGGAGTGCTTAATGAGTTTATTAAGGTTCCCAGAGATCAACACCGAGGGCAATGGTGAAGGGGTTGAATTTAAAGATTACGTTATTAGAAGAAGGCTTAAGGCTGTGAGGGTCGCTCTTACAATACTTGTCCCCAGTGAGCGACGACTTTGTGATAGCGTCTTCTCCGGGATCCCTTCTGTTGCTGATCTTTGTTTCACTGATGTTTGTCGGGGAGCTACCATTCAATTGCTGAATATTGCCGTTGTCACTGCGAGTGGTATCCATTCCAACTGGCGGTTGTTCGAAATCCTTGGTATGCTTCAGGTTTGGTGTAAAATAATTCCTTCGTTTCGATCATTGTTTCCACAGTTAATGGTAAAGAAGGCAATGGCAATGGCAATATTCCAGGACGAACTAGGAAAAGCAAGCATGGCCAATTTTATCAAAGTGAGAAATATGATTTCCCATCACCCAACCTTCAGTATAATGGCCAATCATTGCGGGGTTCTTGTAACGACCATTAATGTCATGAGGTACCTCATTTCTACTTGTTTGCCCCAACAGACCTCGGAGCATAATGTAGCGGGAACATCTTCATCTTCTGTGTATATTGATCGAATAATGAAACATTTCGAGAGAAAATTGGTGGCAGAGAGCAAAAGAATGAATCCTGCACGGCGCTACCTTTCCATGATGAATACTTGGAGGTTTGTAGAGCTAAGCGCAGAAATGTCCGGACTTGATTGTTTGAAAAAATACAGTGCAAAAGTTCAGCAAAACCTCAAATTTTATCAAAGTACTTGGAGTACAGTACTGGAGTTTTTGAAGCTAGAGAACAATACGTTAGTGGAGCCTAATGCTTACGCAGAGTCCCTGAAAAGCAACATCAACTTGTTCAACAATGCCTTTGAACATATATATAGTACTCAGTCTACATGGGTTGTCTTTGACATGCAGCAAAGGGAACAAATAATAATGTCACTTCAAAACATCTTGTTGCCAGCATATGGAAGCTTCATTGGGAGGTTTCAGAATATTCTTGGTAAAGATGCTTTTAATCATATTAGATATGGAATGTTTGATATCCAAAACCAACTCAACAACTGGTTTCTCGAAGGAACGAAAATGATCTACCAAAGAGAGAAAGAAGGACTATTAAAGCTTGTTCAAACTAAAATATGA 2013 0.4074 MTTLDIQLTRWLRQTAVWRFVGFFSTVVGLVCYGRSSSFTLVFGEWSLFKIFLYTVFSLFLCFWSLLHAKVCPRSTCPLFKAHSALLLLTLTSVYSYFTDKAANGKPDVYSLISCAAFAIMSFSLSRQTQCGFEVDLLNFFLGFLILLLMKITLALAVVGVGFSYALIILRSSLDTTSYENCGTQDEHPVVIDMNQARMMQHLVDCAKALGKDNSNLANTLYKHVKEFVEDDSKRQVIDRNFVIDALPLGKTNDFRKTIQLMMGVGLRKECCKVYCNWRRESLKECLMSLLRFPEINTEGNGEGVEFKDYVIRRRLKAVRVALTILVPSERRLCDSVFSGIPSVADLCFTDVCRGATIQLLNIAVVTASGIHSNWRLFEILGMLQVWCKIIPSFRSLFPQLMVKKAMAMAIFQDELGKASMANFIKVRNMISHHPTFSIMANHCGVLVTTINVMRYLISTCLPQQTSEHNVAGTSSSSVYIDRIMKHFERKLVAESKRMNPARRYLSMMNTWRFVELSAEMSGLDCLKKYSAKVQQNLKFYQSTWSTVLEFLKLENNTLVEPNAYAESLKSNINLFNNAFEHIYSTQSTWVVFDMQQREQIIMSLQNILLPAYGSFIGRFQNILGKDAFNHIRYGMFDIQNQLNNWFLEGTKMIYQREKEGLLKLVQTKI 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01952 670 Pfam Exo70 exocyst complex subunit 314 644 IPR046364 GO:0000145|GO:0005546|GO:0006887
Viun8g01952 670 PANTHER EXOCYST COMPLEX PROTEIN EXO70 225 645 IPR004140 GO:0000145|GO:0006887
Viun8g01952 670 Gene3D Exocyst complex component Exo70 191 655 - -
Viun8g01952 670 SUPERFAMILY Cullin repeat-like 216 647 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01952 Viun-Chr8 30057462 30059924 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01952 237 647 EXO70 exocyst subunit family AT5G58430 36.952 2.30e-69 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01952 - - pvu:PHAVU_008G252100g 954.125