Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01949 ATGCTTATCAAAATTCAGAGTTGGCTACATCAGCCAAAGGTATGGAGATTTGTGTGTTTTTCTTCCTCTATTGTTGGACTTGTCTGTTATGCCTTCAACTCCTTTTTAAATCATTTAATTGGAAATTGGAGCTGGTGGAAGATCTTTCTTTACATTGTTTTCAGTTTCTTAATCTCCCTTTCCACCTTGTTTGCAAAGACATGGGAGTACTCCAATTCTCGCTGTTTGGAAGCTCACGTAGCGTTTTCTACTTTGCTGGTCACCAGTGTATACTCCTTTTTTCTTGATAAATATGTGAAAGAGAAACCAGATGTGTATAGTCTGGTTTCGAGTGTTGCATTTGCTATCATGTCTCTAGGCTTGTCTAGGCTGAGTCATTTAGGATTTGAGGTTGATCTTCTCTACTTTTTCTGTGGACTTCTGACTGTACAACTCATGAAAATAAAACTATGGTTAGTCATTGTTGGAGGAGCTTTCAGTTATTCCCTCATCCTTCTTCGTTCCAATTTGGATCGTCAAACAAGAAGTAGGTATTACGCAATTGAACACCAAGATGATGTAGTGATTGAAATTGGTTCGCATTCACAACCACAAGGAACCAGTCATAGTGTTACTCAAGTGGATTCAACCCAAACAGTTGTGGCTAGTTCACACCCAGTAATTGATATGGTTTGGCCTTCAAGAGGAACAGGGCACAATGCTTCTCAAGTAGTTTCATCTCAAGAGGATGGTGCTGGTGGTGCCCCTCCAGAAAACATTTATGGTACCAAGGAATATTTCATGGGTTCTATAGAGGCTCTTAAGAAGGAGAATGGGAGCATTATCAGAGCAATTTCCATGCATGTAGACAAATACCTTAAAGCTAATGTTGTCAGTGAAGACCAGATTTCAGTGCCAGAATTGCATGGCGACGACAACATGGTGGTGGATTCATTGTCGTCACTAATGATCAGCAAGCTTCGTGAAAATGTAGAGAAGATGGTGTCAGATGGATTTGTGGAGGAATGCTTAGACGTGTACAGTAATTGGCGGAGGGAGTTTCTGAAAGAGTGTCTCTGGACATTAGGGTTGCAAGATCAAGAGCTAAACATGGAGGACATTAACAAGATAGAAAAGATTGAGAGGTTGATAAAAGCTATGAACATAGCTGCGAGGATACTCTTTCCCAATGAGAAGAGACTCTTCTATCGTGTCTTTAGCGGCTCCATTTCCTCTGGGGAGTTTCATTTCAGGGAACTTTGCACGGAATTGGCTACTAGTTTGCTGAATTCTGCCCTTGCCTTGACAACTTGGAGCCATTTCATACGCAACACATTGCAGGAGTTGATACAAGAGTTTGAATCATGTACAACATTTATAAATATTGTGGTGCTACTGATAAGGCAGAGATTGTGCATTTATGAGGCTTTGGAAGATGTATCACTCATTCCCGGTGGCGGTATCCATCCTATTACCGTTGAAGGGATGTACTGTATTTATTTGGTTTACAGAAATAGGGAAATTAGTAAAGTTAGACAAGATTTAAAGGAGGGAAAGATTCCATCATCTGTGTATATAACAAAAGTGAGAATTCTGTTAGAGAGTAGTTTGGACGCTAAGTCCAAAAATGGTAATAAGCTTGAAGTGATGTACTACATTAAATCTCTAGACCGAAGTAAGGAGAATAATCTAGGTTTAGGTTTAGATACACTGATTTTACCTGTGTGGATCTACTGGATGATAGAGCTTTTAGAGAGCACTTTGGAAGCCAATTCCAAAAATTACAAAAACCCTTCTTTGGGTTATGTTTTCATCATGAACAACCGGAGATGCATTGAAGTAGAGACAAAACTAAATGGAATGGGACATTTTTTTGGAGATGACTGGCTCCACAAAAACACAAGAAAAATCCAAGAAAACCTTGAACTCTATCTAAGAAGCTCATGGAATAAGATTGTGAACCTTTTGAAGGTAGACATCAATCAACTAGAGCCGAGTGTTGCAGCCAAGTTGATGAAAGACAACCTTTATTGGTTCAACGAACACTTTGACGAGACATGCAACATTCAGTCTGCATGGTCTATCTGTGATGAGGATCTAAGAGAGCAAATAATAAAATCCATAGAAAACATGCTGTTGCCAGCATATGGAAGTTTCCTTGGCACATTTGCCGAATTTGTTGGGAAGCATGCTTATAAATACATTAAGTATGGAATGTTTGAGGTTCAAGATCGACTAAACAAATTGTTTCTTGTAAGGGAGTAG 2244 0.3935 MLIKIQSWLHQPKVWRFVCFSSSIVGLVCYAFNSFLNHLIGNWSWWKIFLYIVFSFLISLSTLFAKTWEYSNSRCLEAHVAFSTLLVTSVYSFFLDKYVKEKPDVYSLVSSVAFAIMSLGLSRLSHLGFEVDLLYFFCGLLTVQLMKIKLWLVIVGGAFSYSLILLRSNLDRQTRSRYYAIEHQDDVVIEIGSHSQPQGTSHSVTQVDSTQTVVASSHPVIDMVWPSRGTGHNASQVVSSQEDGAGGAPPENIYGTKEYFMGSIEALKKENGSIIRAISMHVDKYLKANVVSEDQISVPELHGDDNMVVDSLSSLMISKLRENVEKMVSDGFVEECLDVYSNWRREFLKECLWTLGLQDQELNMEDINKIEKIERLIKAMNIAARILFPNEKRLFYRVFSGSISSGEFHFRELCTELATSLLNSALALTTWSHFIRNTLQELIQEFESCTTFINIVVLLIRQRLCIYEALEDVSLIPGGGIHPITVEGMYCIYLVYRNREISKVRQDLKEGKIPSSVYITKVRILLESSLDAKSKNGNKLEVMYYIKSLDRSKENNLGLGLDTLILPVWIYWMIELLESTLEANSKNYKNPSLGYVFIMNNRRCIEVETKLNGMGHFFGDDWLHKNTRKIQENLELYLRSSWNKIVNLLKVDINQLEPSVAAKLMKDNLYWFNEHFDETCNIQSAWSICDEDLREQIIKSIENMLLPAYGSFLGTFAEFVGKHAYKYIKYGMFEVQDRLNKLFLVRE 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01949 747 Pfam Exo70 exocyst complex subunit 375 740 IPR046364 GO:0000145|GO:0005546|GO:0006887
Viun8g01949 747 PANTHER EXOCYST COMPLEX PROTEIN EXO70 289 743 IPR004140 GO:0000145|GO:0006887
Viun8g01949 747 Gene3D Exocyst complex component Exo70 251 747 - -
Viun8g01949 747 MobiDBLite consensus disorder prediction 232 251 - -
Viun8g01949 747 SUPERFAMILY Cullin repeat-like 295 535 IPR016159 -
Viun8g01949 747 SUPERFAMILY Cullin repeat-like 541 743 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01949 Viun-Chr8 30024621 30027416 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01949 295 743 EXO70 exocyst subunit family AT5G58430 36.157 1.56e-73 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01949 - - vra:106763388 973