Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01948 ATGCTCATCGAAATTCATAGTAGGGTGCTGCAGCCAAAGGTATGGAGATTTGTGTGTTTTGTTTCATCGATTGTTGGACTTGTCTGTTATGCTTTAAGCTCTTCGTTCAATCATTTATGTGGAGCTTGGAAGTGGTGGAAGATCTTTTTGTTTAGCGGTTTTAGTTTGTTCATCTCCCTTTCCATCTTGTTCGCAAAGGCATGGGAGGGCTCCAACTCTCGCTGTTTGGAGGCTCACACAGCCTTCTTGGTTTTGCTGATAACTTCTGTGTACTCCTTTTTCTTCGATAAACAAGTCACAGAAAAACCCGATGCATATAGTCTGGTTTCGTGCGCATCATTTGCTATCATGTCACTAGGCTTGCCAAGACTCAGTCACTTCGGATTTGAGGTTGATCTTCTATATTTTTTCAGTGGATTTCTTACAGTACAACTCATGAAAATAAAATTATGGTTAGTAATTGTTGGAGGGAGTTTCAGTTATTTCCTCCTCATTCTTCGTGCGGCCTTGGATGCTTCAGCAAGAGGTGGGTATGTTGGACTGCATGTCAATGATCACGTAGTCATTGAAATTGGTTCACAATCTCAAGGAACAAGTCGCAATTTTTCACAAGTTGGTTCACCTCAAACTATTACCACCTTTGTTGGTAATTCCCTCGTCATGCCCCAAGACGCCGGTGTCTCTGAAGGAGATGAGGATTCAGGATTCATGGTCACTCAAGGCAGAAATGACAGTAACAAAAGTGTCAAGGCACGATTCATGGAATGTGTAGAGGTGCTGGAGAAGGAGAATAAGACCCTTATCGACACAATTTCGAAGCATGTAGATGGATACCTTAAAGCTAATGTGATCAACAAGATTCCAGTGGTGGAACTCCATGCTGACAACAACTTAGTGGTTGATTCATTGCCTGCAGGAACGATCAACGACCTTCATGAAACCGTGCGGCTGATGTTGGCTGAAGGGTTTGAGGAGGATTGTTGCGGAGCATACTATACATGCCGAAGGGAGTTTCTGAAAGAGTGTCTATGGACTTTTGGGTTGCAAATGCAAGAGTTTAGCACGGAGGAGATTGATATGATGGAGAAGATTCAGTGTTGGTTAACGAAGGTTTTGAATATAGTTGATTGTGTACTCCTTCCCAGTGAAAGGACACTCTGTGATCGCGTCTTTAAAGGGGTCGCTTCCCCTGGGGATTTCGTTTTCAATGTGGTTTGCCGTGAATTGAATATTTGTCTGCTTCGCATAGCCAATCACTTGGCAACTTTTCTGGAGTGTGAAAAATTTACATATTATGAGGGTGCTGAGGTTCACCCTAATATATGTGAATTGATGCTCAAAATTCGTTTTGTTTGCAGACAAAGGGATAATAGATGTAGGCAAGGATTAGAAGGATATACCATGCTTGATAAGGAGGGAAAGCTTTCACCGTCTGTGAATGTGGCCAGGATAATAGCAACAGCCCTGTTAGAGAGAATTTTGGAAGTGGAGTCCAAAAATTACCATAACCCTTCTCTGGGATATGTTTTCCTCTTGAACAATCTGAGTTTCATAGAACAAGAAGCAAAATTCTATGGATTGGTTCCTATTTTTAGTCATGATTGGCTCCGGAAAATAACAACAAAGTTCCAGCAAAACCTTGAACTCTATCTGAGAAGCTCGTGGACTAAGATTGTGGACTTTCTGAAGCTGGATATCAGTGAATCAGAGAATAGTGTTGGGGTTGAGTTAGTGAAAGACAGGATGAATTCGTTCAACGAACATTTTGATGAGATATGCAAAGTTCAGTCTACTTGGTTTGTGTTTGATGAAGAGTTAAAAAGCCATATTATAAAATCCATAGAAAACATGTTGTTGCCAGCATATGGAAACTTCATTGAAAGGTTGCAGAATTTTCTTGGCCAGCACAGTTATTATTATATCAAGTATGGAATGTTTGACGTCCAAGATCGAGTCCGCAATCTGTTTGTTGTGATGAAGAATAAGAATCTGTTTCTGAACAGAAGTGAAAGACACCCAAGGCCTTTGAGTTGA 2034 0.411 MLIEIHSRVLQPKVWRFVCFVSSIVGLVCYALSSSFNHLCGAWKWWKIFLFSGFSLFISLSILFAKAWEGSNSRCLEAHTAFLVLLITSVYSFFFDKQVTEKPDAYSLVSCASFAIMSLGLPRLSHFGFEVDLLYFFSGFLTVQLMKIKLWLVIVGGSFSYFLLILRAALDASARGGYVGLHVNDHVVIEIGSQSQGTSRNFSQVGSPQTITTFVGNSLVMPQDAGVSEGDEDSGFMVTQGRNDSNKSVKARFMECVEVLEKENKTLIDTISKHVDGYLKANVINKIPVVELHADNNLVVDSLPAGTINDLHETVRLMLAEGFEEDCCGAYYTCRREFLKECLWTFGLQMQEFSTEEIDMMEKIQCWLTKVLNIVDCVLLPSERTLCDRVFKGVASPGDFVFNVVCRELNICLLRIANHLATFLECEKFTYYEGAEVHPNICELMLKIRFVCRQRDNRCRQGLEGYTMLDKEGKLSPSVNVARIIATALLERILEVESKNYHNPSLGYVFLLNNLSFIEQEAKFYGLVPIFSHDWLRKITTKFQQNLELYLRSSWTKIVDFLKLDISESENSVGVELVKDRMNSFNEHFDEICKVQSTWFVFDEELKSHIIKSIENMLLPAYGNFIERLQNFLGQHSYYYIKYGMFDVQDRVRNLFVVMKNKNLFLNRSERHPRPLS 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01948 677 PANTHER EXOCYST COMPLEX PROTEIN EXO70 248 421 IPR004140 GO:0000145|GO:0006887
Viun8g01948 677 Gene3D Exocyst complex component Exo70 236 428 - -
Viun8g01948 677 Gene3D Exocyst complex component Exo70 429 663 - -
Viun8g01948 677 SUPERFAMILY Cullin repeat-like 255 656 IPR016159 -
Viun8g01948 677 Pfam Exo70 exocyst complex subunit 434 650 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01948 Viun-Chr8 30021955 30031335 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01948 295 656 EXO70 exocyst subunit family AT1G07000 29.519 1.25e-38 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01948 - - var:108336660 1129.01