Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01947 ATGTTTGTTCCTGAAAGCAAACCTTGCTTCAGAAACAACACAGTACTCATGCTCATCAATATTCAGAGTTGGCTGCATCAGCCAAAGGTATGGAGATTTGTTTGTTTTGTTTCATCTATCGTTGGACTGGTCTGTTATGCTTTCAGCTCCTCTTTCAATCATTTACTTGGAAATTGGAGCTGGTGGAAGATCTTTCTTTACATTCTTTTCAGTTTCTTAATCTCCCTTTCCACCTTGTTTGCAAAGACATGGCAGTACTCCAACTCTCGCTGTTTGGAAGCTCACACAGCCTTTTCTGTTTTGCTGATAACTTCTGTATACTCCTTTTTCCTCGATAAAGATGTGAAACAGAATGCAGATGCATATAGTCTGCTTTCCTCTGTTGCATTTGCTATCATGTCTCTAGGCTTGTCAAGGCTGAGTCACTTAGGATTTGAGGTTGATCTCTTGTATTTTTTCAGCGGACTTCTGATCGTACAACTCATGAAAATAAAACTATGGTTAGTCGTTGTTGGAGCAGCTTTCAGTTATTCCCTCATCCTCCTCCGTTCCAGTTTGGATCCTCAACCAAGAAGTGGTTATCATGGACTTCAACACCAAGATCATGTAGTGGTTGAAATTGGTTCGCATTCACAACCACAAGGAACCAGTTGTAGTAGTGTTACTCCAGTGGATTCACCCCAAACAATTATCACTGCTACTGGTAATGCTTATTCACAACCACACCAAGTAATTTCACCTCAAGAGGGTAGTGTTGGTGGTGGTGCCGCTCTGGAAAACATTGATGGTACCAAGGCATACTTCATGAGTAGTATAGAGGCTCTCAAGAAGGAGAGTGGGAACGTAATCAGTACAATCTCCATGCATGTAGACAAATACCTTAAAGCTAATCTTCTCAGTGAGAACCAGATTGCAGTGCCAGAACTGCATGGCGACGACAACATGTTGGTGGATTCGTTGTCGTCAGGCATGATCAGAAACATTCGTCAAAGTGTAGGTAAGATGGTGTCAGATGGATTTGGGATGGAATGTTTCCAAGTGTACAGTAATTGGCGGAGGGAGTTTCTGAAAGAGAGTTTGTGGACATTAGGGTTGCAAGATCAACAACTGAACATGGAGGACAATAACAAGACGGAGAAGATTGAGAGGTTGATAAAAGCTATGAACATAGCTTGGAGGATACTCTTTCCCAATGAGAGGACACTCTTCAATCGTGTTACCAGCTCCATTCCCTCTAGGCAGTTCCGTTTCAGGGAAATTTGCACAGAATTGACAACTATTCTACTGAACTCTGCCCTTGGCTTGGGAACTTGGAGCCATTTCATGCGCAACACATTGCAGGAGTTGATACAAGAGTTGGAACCATTTACAACACTCAGAAATATTGTACTTCTGCTGATACGGCAGAGACTGTACATTTATGAGGCTTTGGAAGATGCATCACTCATTTCCGGTGGGGGGATTCATCCTACTACCATTGAGGTGATGTACTATGTTTATTCTATTTACAAAAATAAGGAAATTAGTAAAGTTAGCCAAGATTTAAAGGAGGGAAAGATTCCATCATTTGTGTACGAGGCCAGAGTGAGAGTTCTGTTCGACAAGAGTTTGGAAGCTAAGTCAAAAAATGGTAATAAGCTTACGGTTGCGTACTACATGAAATCTCTAAACCAAAGTAGGGAGAGTTCACTTAGAAAAGGTTTAGAAGATGAAATGCTTTCACCTGTGTGGATGGACAGGATGATAGAGCTTTTAGAGAGCAGTTTCGAAGCCAACTCCAAAAATTACAAAAACCCAACTTTGGGTTATGTTTTCATCATGAACAACCGGAGATTCATAGAACTCAAGACAAAACTGAATGGACTGGGACATATTTTTGGAGATGACTGGCTCCACAAAAATACAACAAAACTCCAACAAAACCTTGAACTGTATCTAAGAAGCACGTGGAATAAGATTGTGGAACTTTTGAAGCTAGACATCATCAATCAACTAGAGCCTAGTAATACAGTCGAGTTGATGAAAGACAAGCTTTATCGGTTCAACGAGCAGTTTGATGAGACATGCAACATTCAGTCTGCATGGTCTGTCTGTGATGAGGAGCTAAGGGAGCAAATAATAAAATCCATAGAAAACATGTTGTTGCCAGCATATGGAAGTTTCCTTGGGAGATTTGAGGAATTTGTTGGGAAGCATGCTTATGAGTACATTAAGTATGGAATGTTTGAGCTTCAAGATCGACTCAACAAATTGTTTCTTGTGGAGTAG 2268 0.4092 MFVPESKPCFRNNTVLMLINIQSWLHQPKVWRFVCFVSSIVGLVCYAFSSSFNHLLGNWSWWKIFLYILFSFLISLSTLFAKTWQYSNSRCLEAHTAFSVLLITSVYSFFLDKDVKQNADAYSLLSSVAFAIMSLGLSRLSHLGFEVDLLYFFSGLLIVQLMKIKLWLVVVGAAFSYSLILLRSSLDPQPRSGYHGLQHQDHVVVEIGSHSQPQGTSCSSVTPVDSPQTIITATGNAYSQPHQVISPQEGSVGGGAALENIDGTKAYFMSSIEALKKESGNVISTISMHVDKYLKANLLSENQIAVPELHGDDNMLVDSLSSGMIRNIRQSVGKMVSDGFGMECFQVYSNWRREFLKESLWTLGLQDQQLNMEDNNKTEKIERLIKAMNIAWRILFPNERTLFNRVTSSIPSRQFRFREICTELTTILLNSALGLGTWSHFMRNTLQELIQELEPFTTLRNIVLLLIRQRLYIYEALEDASLISGGGIHPTTIEVMYYVYSIYKNKEISKVSQDLKEGKIPSFVYEARVRVLFDKSLEAKSKNGNKLTVAYYMKSLNQSRESSLRKGLEDEMLSPVWMDRMIELLESSFEANSKNYKNPTLGYVFIMNNRRFIELKTKLNGLGHIFGDDWLHKNTTKLQQNLELYLRSTWNKIVELLKLDIINQLEPSNTVELMKDKLYRFNEQFDETCNIQSAWSVCDEELREQIIKSIENMLLPAYGSFLGRFEEFVGKHAYEYIKYGMFELQDRLNKLFLVE 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01947 755 PANTHER EXOCYST COMPLEX PROTEIN EXO70 281 752 IPR004140 GO:0000145|GO:0006887
Viun8g01947 755 Gene3D Exocyst complex component Exo70 256 755 - -
Viun8g01947 755 SUPERFAMILY Cullin repeat-like 274 752 IPR016159 -
Viun8g01947 755 Pfam Exo70 exocyst complex subunit 480 749 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01947 Viun-Chr8 30017546 30019912 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01947 303 752 EXO70 exocyst subunit family AT5G58430 34.082 8.92e-67 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01947 - - ccaj:109807809 884.789