Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01946 ATGAGAATAAAACTATGGTTAGTCATTGTTGGAGGAGCTTTCAGTTATTCTCTCATCCTTCTCCGTTCCAATTTGGATCCTCAACGCCGAGATCATGCAGTGGTTGCAATTGGTTCGCATTCACAACCACAAGGAACCAGTCATAGAGTTACTCAAGTGGATTCACCCCAAACAATTATCACTGCTACTGGGAATGCTTCTTCACAACCATTCTCAGTCAATGATATTGTTTTGCCTTCAACAGGAACAACACGTAGTGCTTTTCAAGTAGTTTCACCTCAAGAGGGTGGTGCTGGTGGTGCACCCCAAGAAAACATTGATGATACTAAGGCATGCTTCATGGGTTGTGTAGAGGCTCTTAAGAAGGAGAATGCGACTGTTATCAGCACAATTTCCATGCATGTAGACAAATACCTTAAAGCTAATATTCTCAGTGAGGACCAGATTTCAGTGCCAGAATTGCATGGCGACGACAACATGGTGGTGGATTCATTATCGTCACGAATGATCAGCAAACTCCGTGAAAGTGTGGAGAAGATGGTGTCAGATGGATTTGAGGAGGAATGCTTCCACGTGTACAGTAATTGGCGGAGGGAATTTCTGAAAAACAGTCTCTGGACATTAGGGTTGCGAGATCAAGAGCAAAACATGGAGGACGTTAACAAGATAGAGAAGATTGAGAGGTTGATAAAAGCTATGAACATAGCTGCGAGGATACTCTTTCCCAATGAGAAGAGACTCTACTATCGTGTCTTTAGCGGCTCCATTGGGGAGTTTCATTTCAGGGAACTTTGCACGGAATTGGCTAATAGTTTGATGAACTCTGCGCTTGCCTTGGAAACTTGGTGCCATTTCATGCGAAACACATTGCAGGAGTTGATACAAGAGTTTGAATCATGTACAAGTACAACAGTCATAAATATTGTGGTGCTACTGATAAGGCAGAGATTGTACATTTATGAGGCTTTGGAAGATGTATCAGCCATTCCCGGTGGCGGGATTCATCCTATTACCCTTGAAGTGATGTACAACATTTATTCTGTTTACAAAAACGGGGAAATTAGTAAACTTAGCCAAGATTTAGAGGAGGGAAAGATTTCACCATCTGAGTACAGGGTCAGAATGACAAAGCTGTCTGAGAGTAGTTTGGAAGCTGAGTCCGAAAATGGTAATAAGCTTAAAGAGACGTACTACAATTCTCTTCACAAAAGTAGGAAGAGTAGATTTAGCCATGGTTTAGACGAGGGAGTGTTTTCTTCACCTGTGTACTCGGCCAGGATGATACAACTTTTAGAGAGTAGTTTAGAAGCCAACTCCAAAAATTACAAAAACCCGACTTTGTATTATGTTTTCATCATGAACAACAGGAGATTCATTGAAGTAGAGACAAAACTGAATGGACTGGGACCTATTTTTGGAGATGACTGGCTCCACAAAAACACAACAAAACTCCAACAAAACCTTGAACTCTATCTAAGAAGCTCATGGAATAAGATTGTGGACTTTTTGAAGCTAGACATCAATCAACTAGAGCCTAGTGTTGCAGCCGAGGTGATGAAAGACAACCTTTATTGGTTCAACGAACACTTTGACGAGACATGCAACATTCAGTCTGCATGGTCTGTCTGTGATGAGGAGCTAAGGGAGCAAATAATAAAATTCATAGAAAACATGCTCTTGCCAGCATATGGAAGTTTCCTTGGGAGATTTGAGGAATTTGTTGGGAAGCATGCTTATAAGTACATTAAGTATGGAATGTTTGAGGTTCAAGATCGGCTCAACAAATTATTTCTTGTAAGGGGGTAG 1806 0.4125 MRIKLWLVIVGGAFSYSLILLRSNLDPQRRDHAVVAIGSHSQPQGTSHRVTQVDSPQTIITATGNASSQPFSVNDIVLPSTGTTRSAFQVVSPQEGGAGGAPQENIDDTKACFMGCVEALKKENATVISTISMHVDKYLKANILSEDQISVPELHGDDNMVVDSLSSRMISKLRESVEKMVSDGFEEECFHVYSNWRREFLKNSLWTLGLRDQEQNMEDVNKIEKIERLIKAMNIAARILFPNEKRLYYRVFSGSIGEFHFRELCTELANSLMNSALALETWCHFMRNTLQELIQEFESCTSTTVINIVVLLIRQRLYIYEALEDVSAIPGGGIHPITLEVMYNIYSVYKNGEISKLSQDLEEGKISPSEYRVRMTKLSESSLEAESENGNKLKETYYNSLHKSRKSRFSHGLDEGVFSSPVYSARMIQLLESSLEANSKNYKNPTLYYVFIMNNRRFIEVETKLNGLGPIFGDDWLHKNTTKLQQNLELYLRSSWNKIVDFLKLDINQLEPSVAAEVMKDNLYWFNEHFDETCNIQSAWSVCDEELREQIIKFIENMLLPAYGSFLGRFEEFVGKHAYKYIKYGMFEVQDRLNKLFLVRG 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01946 601 Gene3D Exocyst complex component Exo70 101 600 - -
Viun8g01946 601 Pfam Exo70 exocyst complex subunit 228 594 IPR046364 GO:0000145|GO:0005546|GO:0006887
Viun8g01946 601 SUPERFAMILY Cullin repeat-like 142 597 IPR016159 -
Viun8g01946 601 PANTHER EXOCYST COMPLEX PROTEIN EXO70 109 597 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01946 Viun-Chr8 30013138 30015927 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01946 148 597 EXO70 exocyst subunit family AT5G58430 34.917 2.47e-71 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01946 - K07195 vra:106763388 843.573