Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01945 ATGCTCATGCTCATCAAAATTCAGAGTTGGCTTCATCAGCCAAAGGCATGGGAGTACCCCAACCCTCGTTGTTTGGAAGCTCACACATCATTTTCTATTTTGGTAATCACTTCTGTATACTCCTTCTTTCTTGATAAAGATGTGAAAGAGAAAGCAGATGCATATAGTCTGGTTTCCTCTGTTGCATTTGATATCATGTCTCTAGGCTTGTCAAGGCTGAGTCAATTAGGATTTGGGGTTGATCTCTTGTATTTTTTCAGTGGACTTCTGACTGTACAACTCATGAGAATAAAACTATGGTTAGTCATTGTTGGAGGAGCTTTCAGTTATTCTCTCATCCTTCTCCGTTCCAATTTGGATCCTCAACGCCGAGATCATGCAGTGGTTGCAATTGGTTCGCATTCACAACCACAAGGAACCAGTCATAGAGTTACTCAAGTGGATTCACCCCAAACAATTATCACTGCTACTGGGAATGCTTCTTCACAACCATTCTCAGTCAATGATATTGTTTTGCCTTCAACAGGAACAACACGTAGTGCTTTTCAAGTAGTTTCACCTCAAGAGGGTGGTGCTGGTGGTGCACCCCAAGAAAACATTGATGATACTAAGGCATGCTTCATGGGTTGTGTAGAGGCTCTTAAGAAGGAGAATGCGACTGTTATCAGCACAATTTCCATGCATGTAGACAAATACCTTAAAGCTAATATTCTCAGTGAGGACCAGATTTCAGTGCCAGAATTGCATGGCGACGACAACATGGTGGTGGATTCATTATCGTCACGAATGATCAGCAAACTCCGTGAAAGTGTGGAGAAGATGGTGTCAGATGGATTTGAGGAGGAATGCTTCCACGTGTACAGTAATTGGCGGAGGGAATTTCTGAAAAACAGTCTCTGGACATTAGGGTTGCGAGATCAAGAGCAAAACATGGAGGACGTTAACAAGATAGAGAAGATTGAGAGGTTGATAAAAGCTATGAACATAGCTGCGAGGATACTCTTTCCCAATGAGAAGAGACTCTACTATCGTGTCTTTAGCGGCTCCATTGGGGAGTTTCATTTCAGGGAACTTTGCACGGAATTGGCTAATAGTTTGATGAACTCTGCGCTTGCCTTGGAAACTTGGTGCCATTTCATGCGAAACACATTGCAGGAGTTGATACAAGAGTTTGAATCATGTACAAGTACAACAGTCATAAATATTGTGGTGCTACTGATAAGGCAGAGATTGTACATTTATGAGGCTTTGGAAGATGTATCAGCCATTCCCGGTGGCGGGATTCATCCTATTACCCTTGAAGTGATGTACAACATTTATTCTGTTTACAAAAACGGGGAAATTAGTAAACTTAGCCAAGATTTAGAGGAGGGAAAGATTTCACCATCTGAGTACAGGGTCAGAATGACAAAGCTGTCTGAGAGTAGTTTGGAAGCTGAGTCCGAAAATGGTAATAAGCTTAAAGAGACGTACTACAATTCTCTTCACAAAAGTAGGAAGAGTAGATTTAGCCATGGTTTAGACGAGGGAGTGTTTTCTTCACCTGTGTACTCGGCCAGGATGATACAACTTTTAGAGAGTAGTTTAGAAGCCAACTCCAAAAATTACAAAAACCCGACTTTGTATTATGTTTTCATCATGAACAACAGGAGATTCATTGAAGTAGAGACAAAACTGAATGGACTGGGACCTATTTTTGGAGATGACTGGCTCCACAAAAACACAACAAAACTCCAACAAAACCTTGAACTCTATCTAAGAAGCTCATGGAATAAGATTGTGGACTTTTTGAAGCTAGACATCAATCAACTAGAGCCTAGTGTTGCAGCCGAGGTGATGAAAGACAACCTTTATTGGTTCAACGAACACTTTGACGAGACATGCAACATTCAGTCTGCATGGTCTGTCTGTGATGAGGAGCTAAGGGAGCAAATAATAAAATTCATAGAAAACATGCTCTTGCCAGCATATGGAAGTTTCCTTGGGAGATTTGAGGAATTTGTTGGGAAGCATGCTTATAAGTACATTAAGTATGGAATGTTTGAGGTTCAAGATCGGCTCAACAAATTATTTCTTGTAAGGGGGTAG 2088 0.4114 MLMLIKIQSWLHQPKAWEYPNPRCLEAHTSFSILVITSVYSFFLDKDVKEKADAYSLVSSVAFDIMSLGLSRLSQLGFGVDLLYFFSGLLTVQLMRIKLWLVIVGGAFSYSLILLRSNLDPQRRDHAVVAIGSHSQPQGTSHRVTQVDSPQTIITATGNASSQPFSVNDIVLPSTGTTRSAFQVVSPQEGGAGGAPQENIDDTKACFMGCVEALKKENATVISTISMHVDKYLKANILSEDQISVPELHGDDNMVVDSLSSRMISKLRESVEKMVSDGFEEECFHVYSNWRREFLKNSLWTLGLRDQEQNMEDVNKIEKIERLIKAMNIAARILFPNEKRLYYRVFSGSIGEFHFRELCTELANSLMNSALALETWCHFMRNTLQELIQEFESCTSTTVINIVVLLIRQRLYIYEALEDVSAIPGGGIHPITLEVMYNIYSVYKNGEISKLSQDLEEGKISPSEYRVRMTKLSESSLEAESENGNKLKETYYNSLHKSRKSRFSHGLDEGVFSSPVYSARMIQLLESSLEANSKNYKNPTLYYVFIMNNRRFIEVETKLNGLGPIFGDDWLHKNTTKLQQNLELYLRSSWNKIVDFLKLDINQLEPSVAAEVMKDNLYWFNEHFDETCNIQSAWSVCDEELREQIIKFIENMLLPAYGSFLGRFEEFVGKHAYKYIKYGMFEVQDRLNKLFLVRG 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01945 695 Pfam Exo70 exocyst complex subunit 322 688 IPR046364 GO:0000145|GO:0005546|GO:0006887
Viun8g01945 695 SUPERFAMILY Cullin repeat-like 236 691 IPR016159 -
Viun8g01945 695 PANTHER EXOCYST COMPLEX PROTEIN EXO70 202 691 IPR004140 GO:0000145|GO:0006887
Viun8g01945 695 Gene3D Exocyst complex component Exo70 182 694 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01945 Viun-Chr8 30013137 30015927 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01945 242 691 EXO70 exocyst subunit family AT5G58430 34.917 2.97e-70 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01945 - - vra:106763388 890.182