Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01944 ATGCTCTTCAAAATTCGGAGTTGGCTACATCAGCCAAAGGTATGGAGATTTGTGTGTTTTGCTTCATCTATTGTTGGACTTCTCTGTAATGCTTTCAGCTCCTCTTTCTATCTTTTACTTGGAAATTGGAACTGGTGGAAGATCTTTCTTTATATTGTTTTCAGTTTCTTAATCTCCCTGTCCACCTTGTTTGCAAAGACATGGGAGTACTCCAATCCTCGCTGTTTGGAAGCTCACACAGCATTTTCTATTCTGGTGATCACTTCTGTATACTCCTTTTTCCTTGATAAAGATGTGAAACAGAAAGCAGATGCATATAGTCTGCTTTCGTGGGTTGCATTTGCTATCATGTCTTTAGGCTTGTCAAGGCTGAGTCAAGTAGGATTTGGGATTGATCTTCTGTATTTTTTCAGTGGACTTCTCACTGTACAACTCATGAAAATAAAAGTATGGTTAGTCATTGTTGGAGGAGCTTTCAGTTATTTCCTCATACTTCTCCGTCCCAATTTGGATTCTGAACCAAGAAGTGTATATCATGGACTTCAATACCAAGATCACGTAGTGGTTGAAATTGGTTCGCATTCACAATCACAAGGAACCAGTCATAGCGTTACTCAAGTGGATTCACCCCAAACAATTATGGCTACTTCACAACCACACCCAGTCATTGATATGGTTTGGCCTTCAAGAGGAACAACACATGGTGCTGGTGGTCCCCCTCCAGAAAACATTGATGGTACCAAGGAATGCTTCATGAGTTGTATAGAGGCTCTTAAAGAGGAGAATGCGAGCGTTATCAGCACAATTTCCATGCATGTAGACAAATACCTTAAAGCTCATCTTCTCAGTGAGGACAATATTTCAGTGGCGCTGCCGGTGACCGACTTCGACATCGTCATCAACGCACTGCCGTCGGGGACGATCAACGACCTCCACGAAATCGTGAAGCGAATGGTAGCTGGCGGGTTTGGTAAGGAGTGCTCGCACGTGTACAGCAGTTGCCGGAGGGAGTTCCTGGAGGAGAGCGTGTCGAGGTTAGGGTTACAGAAGCTCTGCATCGAAGACGTTCACAAGATGACGTGGCAGGATCTTGGAGATGAAATTGAGGAATGGATTAAAGCCTCCAACATCGCTCTCAAGATCCTCTTCCCCAGCGAGCGGCGTCTCTGTGACCGAGTCTTCTTCGGATTTGCGTCCGCCGCGGATTTTTCGTTTATGGAGGTTTGTCGCGGATACGCGATTCAGTTGCTGGATTTCGCCGACGCCATCGCGATCGGGAGCCGGAAGCCGGAACAGCTGTTCAGAATCCTCGACATGTTCGAGACGCTGTGTGTCCTAATTCCCGAATTTGAGGCTCTGTTTTCTGATCAGTTCAGCGTCTCGCTCAGGAACAAAGTGATTACTATTAGGAGGAGGCTGGGGGAATCAATTAGGGGCATTTTTATGGAGCTGGAGAATTCAATTCGCCGGAATCGGGCGAAGACGGCAGTTCCTGGTGGCGGTGTTCACCCTATTACTCGCTACGTGATGAACTACCTCCTTACGGCGTGCAGGTCACGGCAGAGCTTGGATCAGGTTTTGTCTTCTTCTCTATCAGTGCAAATGAATTGGATTGTTGAGCTGCTAGAGAGCAATTTGGAAGCGCAGTCGAAGATTTACAAGGACCCTGCTTTGTGCTACCTTTTCTTGATGAATAATGGGAAGTATATTGTTGAAAAGGTCAAAGATAGTGAACTAGGAACCCTCTTGGGAGACTATTGGATCAGAAAACGTGCTGCAAAAGTTCAACAAATCCATGTGCACTATCAAAGAAGCTCGTGGAGTTGGGTAATAGGGATTCTGAAGCTGGATAGTACTGTCTCACTGCCCCCTAATGCCTTAGCAAAGTCAATGAAGGAGAAACTCAAGTCGTTTAACACGATGTTTGATGATATTTGCAAGGAACAATCTTCCTGGTTTGTTTTTGATGAACAGCTCAGGGAAGAAATAAGAGTTTCTCTTGAGAAAATTTTGTTGCCTGCATATGAAAACTTCATAGTAAGTTTTGAGAATGCTCCAGAGATTGGTAAGCATGGTAAGCATATCAAATATGGAACAGCGGACATTCAAGTCAAACTTAACAAATTGTTTACGGAATCAAGCGTTAACCGAAAGTTGTTGGAAGGAATTGGAAACTTGAGCAATACAGAATATTCTTAA 2199 0.4438 MLFKIRSWLHQPKVWRFVCFASSIVGLLCNAFSSSFYLLLGNWNWWKIFLYIVFSFLISLSTLFAKTWEYSNPRCLEAHTAFSILVITSVYSFFLDKDVKQKADAYSLLSWVAFAIMSLGLSRLSQVGFGIDLLYFFSGLLTVQLMKIKVWLVIVGGAFSYFLILLRPNLDSEPRSVYHGLQYQDHVVVEIGSHSQSQGTSHSVTQVDSPQTIMATSQPHPVIDMVWPSRGTTHGAGGPPPENIDGTKECFMSCIEALKEENASVISTISMHVDKYLKAHLLSEDNISVALPVTDFDIVINALPSGTINDLHEIVKRMVAGGFGKECSHVYSSCRREFLEESVSRLGLQKLCIEDVHKMTWQDLGDEIEEWIKASNIALKILFPSERRLCDRVFFGFASAADFSFMEVCRGYAIQLLDFADAIAIGSRKPEQLFRILDMFETLCVLIPEFEALFSDQFSVSLRNKVITIRRRLGESIRGIFMELENSIRRNRAKTAVPGGGVHPITRYVMNYLLTACRSRQSLDQVLSSSLSVQMNWIVELLESNLEAQSKIYKDPALCYLFLMNNGKYIVEKVKDSELGTLLGDYWIRKRAAKVQQIHVHYQRSSWSWVIGILKLDSTVSLPPNALAKSMKEKLKSFNTMFDDICKEQSSWFVFDEQLREEIRVSLEKILLPAYENFIVSFENAPEIGKHGKHIKYGTADIQVKLNKLFTESSVNRKLLEGIGNLSNTEYS 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01944 732 PANTHER EXOCYST COMPLEX PROTEIN EXO70 245 710 IPR004140 GO:0000145|GO:0006887
Viun8g01944 732 Pfam Exo70 exocyst complex subunit 370 707 IPR046364 GO:0000145|GO:0005546|GO:0006887
Viun8g01944 732 Gene3D Exocyst complex component Exo70 242 718 - -
Viun8g01944 732 SUPERFAMILY Cullin repeat-like 275 710 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01944 Viun-Chr8 30003112 30005609 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01944 287 718 EXO70 exocyst subunit family AT5G58430 66.591 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01944 K07195 - gmx:100803694 677.167