Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01943 ATGCTCATCAAAATTCAGAGTTGGCTACATCAGCCAAAGGTATGGAGATTTGTTTGTTTTGCTTCATCTATCGTTGGACTTATCTGTTATGCTTTCAGCTCCTCTTTCAATCATTTAATTGGAAATTGGAGCTGGTGGAAGATCTTTCTTTACATTCTTTTCAGTCTCTTAATCTCCCTTTCAACCTTGTTTGCAAAGACATGGCAGTACTCTAACTCTCGCTGTTTGGAAGCTCACACAGCGTTTTCTACTCTGCTGATCACTAGTGTATATTCCTTTTTCCTTGATAAAGATGTGAAACAGAACCCAGATGTATATAGTCTGGTTTCAAGTGTTGCATTTGCTATCATGTCTTTGGGCTTGTCAAGGCTGAGTCAGTTAGGATTTGAGGTTGATCTCCTCTATTTTTTCTGTGGACTTCTGACTGTACAACTCATGAAATTAAAACTATGGTTAGTCATCGTTGGAGGAACTTTCAGTTATTCCCTCATCCTTCTTCGTTCCAATTTGGATCCTCAACCAAGAAGTGGTTATCATGGACTTCAACACCAAGATCATGTAGTGGTTGAAATTGGTTCCCATTCACAACCACAAGGAACCGGTGATAGTGTTACTCAAGTGGATTCGCCCCAAACAATTATGGCTACTTCACAACCACACCAGGTCATGGATTTGGTTTGGCCTTCTAGAGAAACAACACGTAGTGCTTCTCAAGTAGTTTCACCTCAAGAGGCTGGTGGTGCCCCTCCAGAAAGCATTGATGGTACCAAGGAATGCTTCATGGGTTGTATAGAGACTCTTAAGAAGGAGAATAGGAGCGTTATTAGCGCTATTTCCATGCATGTAGACAAATACCTTAAAGCTAATGTTGTCGGTGAGAATCAGATTTCAGTGCCAGAATTGCATGGCGACAACAACATGGTGGTGGATACATTGTCGTCAGGAATGATGAGCAAGCTTCGTGAAAGTGTAGAGAAGATGGTGTCAGATGGATTTGAGGAGGAATGCTTAGACGTGTACAGTAATTGGCGGAGGGAGTTTCTGAAAGAGAGTTTATGGAGATTAGAGTTGCAAGATCAAGAGCTCAACATGGAGGACATTAACAGGAAAGAAAAGATTGAGAGGTTGATAAAAGCTATGAACATAGCTGCGAGGATACTCTTTCCGAATGAGAGGAGACTCTTCAGTCGTGTATTTAGCAGCTCCATCCACTCTAGGGAGTTGTTTCATTTCAGGAAACTTTGCACGGAATTGACCACTAGTCTGCTGAACTCTGCCCTTGCCTTGGAAACTTGGAGTCATTTCATGCGCAACGCATTGCAGGGGTTGATACAAGAGTTTGAATCATGTACAATCAGAAATATTGTAGTGCAGCTGATACGACAGAGATTGAATATTTACGAGGCTTTGGAAGATGCATCACCCATTCCCGGTGGCGGGATTCATCCTGAGACCCTTGAAGTGATGTACCGTATTTATTCTGTTCACAGAGATAGGGAAATTACTAAAGTTAGCCAAGATTTAAAGGAGGGAAAGATTCCATCATCTGTGTATATAACAAAAGTGAGAACTCTGTTAGTGAGTAGTTTGGAAGCTAAGTCGTCCATAAGAGGTAATAAGCTTAAAGTGATGCACTACACTAAATCTCCAATCCCAAGAAGGAAGAGTGAACTTAGAAAAGGTTCAGAAGATGAAATGATTTCACCTGTGTACATGGACAGGATGACAGAGCTTTTAGAGAACCTTTTGGAAGTCAGCTCCAAAAATTACAAAAACCCTATTTTGGGTTATGTTTTCATCATGAACAACCGGAGATTCATAGAAGTAGAGGCAAAATTGAATGGACTGGGACCTATTTTTGGAGATGACTGGCTCCACAAAAACACAAGAAAACTCCAAGAAAACCTTGAACTCTATCTAAGAAGCTCATGGAATAAGATCGTGGACCTTTTGAAGATAGACATCAACAATCAACTAGAGCCTAGTGTTGCGATCGAGTTGATGAAAGACGACCTTTATTGGTTCAACGAACACTTTGACAACACATGCAACATTCAGTCTGCATGGTCTGTCTGTGATGAGGAGTTAAGGGAGCAAATAATAAAATCCATAGAAAGCATGCTGTTGCCAGCATATGGAAGTTTCCTTGGGAGATTTGAGGAACTTGTTGGGAAGCATGCTTATGAATACATTAAGTATGGAATGTTTGAGGTTCGAGACCAACTCAACAACTTGTTTCTTGTAAGGGAGTAG 2253 0.4092 MLIKIQSWLHQPKVWRFVCFASSIVGLICYAFSSSFNHLIGNWSWWKIFLYILFSLLISLSTLFAKTWQYSNSRCLEAHTAFSTLLITSVYSFFLDKDVKQNPDVYSLVSSVAFAIMSLGLSRLSQLGFEVDLLYFFCGLLTVQLMKLKLWLVIVGGTFSYSLILLRSNLDPQPRSGYHGLQHQDHVVVEIGSHSQPQGTGDSVTQVDSPQTIMATSQPHQVMDLVWPSRETTRSASQVVSPQEAGGAPPESIDGTKECFMGCIETLKKENRSVISAISMHVDKYLKANVVGENQISVPELHGDNNMVVDTLSSGMMSKLRESVEKMVSDGFEEECLDVYSNWRREFLKESLWRLELQDQELNMEDINRKEKIERLIKAMNIAARILFPNERRLFSRVFSSSIHSRELFHFRKLCTELTTSLLNSALALETWSHFMRNALQGLIQEFESCTIRNIVVQLIRQRLNIYEALEDASPIPGGGIHPETLEVMYRIYSVHRDREITKVSQDLKEGKIPSSVYITKVRTLLVSSLEAKSSIRGNKLKVMHYTKSPIPRRKSELRKGSEDEMISPVYMDRMTELLENLLEVSSKNYKNPILGYVFIMNNRRFIEVEAKLNGLGPIFGDDWLHKNTRKLQENLELYLRSSWNKIVDLLKIDINNQLEPSVAIELMKDDLYWFNEHFDNTCNIQSAWSVCDEELREQIIKSIESMLLPAYGSFLGRFEELVGKHAYEYIKYGMFEVRDQLNNLFLVRE 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01943 750 PANTHER EXOCYST COMPLEX PROTEIN EXO70 251 746 IPR004140 GO:0000145|GO:0006887
Viun8g01943 750 SUPERFAMILY Cullin repeat-like 296 535 IPR016159 -
Viun8g01943 750 MobiDBLite consensus disorder prediction 233 252 - -
Viun8g01943 750 Gene3D Exocyst complex component Exo70 229 750 - -
Viun8g01943 750 Pfam Exo70 exocyst complex subunit 469 743 IPR046364 GO:0000145|GO:0005546|GO:0006887
Viun8g01943 750 SUPERFAMILY Cullin repeat-like 557 746 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01943 Viun-Chr8 29991839 29994583 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01943 295 746 EXO70 exocyst subunit family AT5G58430 34.542 3.59e-61 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01943 - - vra:106763388 913.294