Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01942 ATGGTGGTGGATTCATTGTCGCCACGAATGATCAGCAACCTTCGAGAAAGTGTAGCGAAATTGGTATCAGATGGATTTTTTGAAGAGGAATGCTTAGACGTGTACAGTAGTTGGCGGAGGGAGTTTCTGAAAGAGAGTTTATTGACATTAGGGTTGCAAGATCAAGAGCTCAACATGGAGGACATTAACAAGACTGAGAAGATTGAGAGGTTGATAAAAGCTATGAACATAGCTTGGAGGATACTTTTTCCCAATGAGAGGACACTCTTCAATCGTGTTACCGGCTCCATTCCCTCTAGGCAGTTTCGTTTCAGGGAAATTTGCACAGAATTGACAACTAGTCTGCTGAACTCTGCCCTTGCCTTGGAAACTTGGAGTCATTTCTTGCGCAACACATTGAAGGAGTTGATACAAGAGTTTGAATCATGGAGATTCACAAATATTGTAGCGCAGCTGGTAAGGCAGAGATTGTCCATTTATGAGGCTTTCGAAGATGTATCAGCCATTCCCGGTGGCGGGATTCATCCGATTACCCTTGAAGTGATGATGTACTGTATTAATTCTAAACTTGGACAGGGTTTAAAAGATAAAACGATTTCACCTGTGTGGATGGACAGGATGCCAGAGCTTTTAGAGAGCAGTTTGGAAGCCAACTCCAAAAATTACAAAAACCCTTTGGGTTATGTTTTCGTCCTGAACAACCGGAGATTCATAGAAGTACAGGCAAAACTAAATGGACTGGGACTTTTTTTTGGAGATGACTGGCTCCACAAAAATACAACAAAACTCCAACAAAACCTTGAACTCTATCTAAGAAGCTCGTGGAATAAGGTTGTAGACTTTTTGAAGGTAGACATCAATCAACTGGAGCCTAGTGTTGCGACCGAGTTGATGAAAGACAACCTTTATTGGTTTTACGAACACTTTGATGAGACATGCAACATTCAGTCTTCATGGTTTGTCTGTGATGAGGAGTTAAGGGAACAAATAATAAAATCCGTAGAAAACATCCTGTTGCCAGCTTATGGAAGTTTCCTTGGCACATTTGAGGAATTTCTTGGGAAGCATGCTTATGATTACATTAAGTATGGATTGTTTGAGGTTCAAGATCAACTCAGCAACTTGTTTCTTCTAAAAGGTAGTGAATCTTTAGCTGGAAGAAAAGGAAAGGTTAAGCTAGTCAAATATAAAGAACTGTAA 1200 0.4042 MVVDSLSPRMISNLRESVAKLVSDGFFEEECLDVYSSWRREFLKESLLTLGLQDQELNMEDINKTEKIERLIKAMNIAWRILFPNERTLFNRVTGSIPSRQFRFREICTELTTSLLNSALALETWSHFLRNTLKELIQEFESWRFTNIVAQLVRQRLSIYEAFEDVSAIPGGGIHPITLEVMMYCINSKLGQGLKDKTISPVWMDRMPELLESSLEANSKNYKNPLGYVFVLNNRRFIEVQAKLNGLGLFFGDDWLHKNTTKLQQNLELYLRSSWNKVVDFLKVDINQLEPSVATELMKDNLYWFYEHFDETCNIQSSWFVCDEELREQIIKSVENILLPAYGSFLGTFEEFLGKHAYDYIKYGLFEVQDQLSNLFLLKGSESLAGRKGKVKLVKYKEL 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01942 399 Gene3D Exocyst complex component Exo70 2 383 - -
Viun8g01942 399 Pfam Exo70 exocyst complex subunit 197 373 IPR046364 GO:0000145|GO:0005546|GO:0006887
Viun8g01942 399 PANTHER EXOCYST COMPLEX PROTEIN EXO70 3 376 IPR004140 GO:0000145|GO:0006887
Viun8g01942 399 SUPERFAMILY Cullin repeat-like 3 376 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01942 Viun-Chr8 29988756 29989955 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01942 1 388 EXO70 exocyst subunit family AT5G58430 37.671 4.25e-69 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01942 - K07195 vun:114195088 790.801