Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01941 ATGTCTTTGGGCTTGTCAAGGCTGAGTCAGTTAGGATTTGAGGTTGATCTCCTCTATTTTTTCTGTGCACTTCTGACTGTACAACTCATGAAAGTAAAATTATGGTTAGTCACTGTTGGAGGAGCTTTCAGTTATTCCCTCATCCTTCTTCGTTCCAATTTGGATCCTCAACCAAGGAACGGGTATCATGGACTTCGACACCAAGATCATGTAGTGGTTGAAATTGGTTCGCATTCACAGCCACAAGGAGTCAGTCATAGTGTTACTCCAGTGAATTCACCCCAATCAACTATCGCTAGTTCACAACCACACCCAGTCATTGATATGGTTTGGCCTTCAACAGGGACAACACATACGGCTTCTCGAGTAGTTTCAACTCCAGAGGGTGGCGCTGGTGGTGTCCCTCAAGAAAACATTGATGATACGAAGGAATGCTTCATGAGTTGCATAGAGGCTCTTAAGAAGGAGAGTGAGAGCGTTATCAGCACAATTTTCATGCATGTAGACAAATACCTTAAAGCTAATATTCTCAGTAGGGACAAAATTTCAGAGTCGCTGCCGGTGACCGACTTCGACATTGTCATCGACGCGCTGCCGCCGGGGACGGTCAACGAACTCCGCGAGACCGCGAAGCGAATGGTGGCCGGTGGGTTGGGTAAGGAGTGCTCGAACGTGTACAGCAGTTGCCGTAGGGAGTTCCTGGAGGAGAGCGTGTCGAGGTTAGGGTTAATGAAGCTTAGCATAGAGGACGTTGAAAAGATGACGTGGGAGGACCTTAAAGATGAAATAGAGAAATGGATTAAAGCCTCGAACGTCGCTCTCAAGATCCTCTTCCCCAGCGAGCGGCGTCTCTGTGACCGCGTTTTCTTCGGATTCGCCTCCGTCGTGGATTTTACCTTTATGGAGGTTTGCCGCGGATCCGCAATTCAGTTGCTAGATTTCGCCAACGCAGTCGCGGTCGGGAGCCGGTCGCCGGAATGGCTGTTCAGTATCCTCGACGTGTTCGAGACGCTGCGTGACCTAATTCCCGAATTTGAGGCTCTGTTTTCTGATCAGTTGAGCATCTCGCTCAGGCACGAGGTGATTACTATTTGGAAGAGGCTGGGGGAATCGATTAGGGGCATTTTTATGGGACTGGAGAATTTAGTTCGCCGGGATCCCGCAAAGACTGCGGTTCCTGGTGGCGGTCTTCACCCGATTACTCGCTTCGTGATGAACTACCTCCGTGCGGCGTGCCGGTCACGGCAGAGCTTGGAGCAGGCTTTTGAAGAATACGGGTTGAAAGAGTACCCAAAGCTTGATGATAGAGCTCACTCATCTTGTTCTTTATCAGAGGAAATGAATTGGATTATGGAGCTATTAGAGAGCAATTTGGAAGCGAAGTCGAAGATTTACAAGGACCCTGCTTTGTGCTATGTTTTCTTGATGAATAATGGGAGGTATATTGTTCAAAAGGCCAAAGATAGTGAACTAGGAACCCTCTTGGGAGATGACTGGATCAGAAAACACGCTGCAAAAGTTCAACAATTCCATGTGCACTATCAAAGAAGCTCGTGGGGGAGGGTATTGGGAATTCTGAACCTGGATAGTACTGTCTCACTGCCCCCTAATGCCTTAGCAAGGTCACTGAAGGAGAAGCTTAAGTCGTTTAACACGATGTTTGATTATATTTGCAAGGAACAGTCTTCCTGGTTTGTTTTTGATGAACAGCTCAGGGAAGAAATAAGAATTTCTCGAGAGAAAATCTTGTTGCCTGCGTATGTAAACTTCATAGTTAGGTTCCAGAATGTTCCAGAGATCGGTAAGGACGCTGATAAGTATATCAAGTATGTGACAGAGGACATTCATGCCAAACTCAACGAATTATGTCACGAATCAATTGTTATTGATATGGTTCGGCCTTCAAGAGGAACATCACGTAATTCTTCAAAAGTAGTTTTACCTCAAGAGGGTGGTGCTGGTGGTGCCCCCGAGAAAGCATTGATGGTACTAAGGCATGCTTCATGGGTTGTATAG 2016 0.4688 MSLGLSRLSQLGFEVDLLYFFCALLTVQLMKVKLWLVTVGGAFSYSLILLRSNLDPQPRNGYHGLRHQDHVVVEIGSHSQPQGVSHSVTPVNSPQSTIASSQPHPVIDMVWPSTGTTHTASRVVSTPEGGAGGVPQENIDDTKECFMSCIEALKKESESVISTIFMHVDKYLKANILSRDKISESLPVTDFDIVIDALPPGTVNELRETAKRMVAGGLGKECSNVYSSCRREFLEESVSRLGLMKLSIEDVEKMTWEDLKDEIEKWIKASNVALKILFPSERRLCDRVFFGFASVVDFTFMEVCRGSAIQLLDFANAVAVGSRSPEWLFSILDVFETLRDLIPEFEALFSDQLSISLRHEVITIWKRLGESIRGIFMGLENLVRRDPAKTAVPGGGLHPITRFVMNYLRAACRSRQSLEQAFEEYGLKEYPKLDDRAHSSCSLSEEMNWIMELLESNLEAKSKIYKDPALCYVFLMNNGRYIVQKAKDSELGTLLGDDWIRKHAAKVQQFHVHYQRSSWGRVLGILNLDSTVSLPPNALARSLKEKLKSFNTMFDYICKEQSSWFVFDEQLREEIRISREKILLPAYVNFIVRFQNVPEIGKDADKYIKYVTEDIHAKLNELCHESIVIDMVRPSRGTSRNSSKVVLPQEGGAGGAPEKALMVLRHASWVV 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01941 671 PANTHER EXOCYST COMPLEX PROTEIN EXO70 140 621 IPR004140 GO:0000145|GO:0006887
Viun8g01941 671 MobiDBLite consensus disorder prediction 80 101 - -
Viun8g01941 671 SUPERFAMILY Cullin repeat-like 170 622 IPR016159 -
Viun8g01941 671 Pfam Exo70 exocyst complex subunit 265 621 IPR046364 GO:0000145|GO:0005546|GO:0006887
Viun8g01941 671 Gene3D Exocyst complex component Exo70 134 627 - -
Viun8g01941 671 MobiDBLite consensus disorder prediction 635 654 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01941 Viun-Chr8 29985642 29988900 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01941 181 622 EXO70 exocyst subunit family AT5G58430 68.326 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01941 K07195 - gmx:100803694 747.658