Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01940 ATGCTCTTCAAAATTCAGAGTTGGCTACATCAGCCAAAGACATGGCAGTACTCCAACTCTCGCTGTTTGGAAGCTCACACAGCGTTTTCTATTTTGCTGATCACTTCTATATACTCTTTTTTCCTTGATAAAGATGTGAAACAGAGACCAGATGTATATAGTCTGGTTTCCTATGTTGCATTTGCTATCATGTCTTTGGGCTTGTCAAGGCTGAGTCAGTTAGGATTTGAGGTTGATCTCCTCTATTTTTTCTGTGCACTTCTGACTGTACAACTCATGAAAGTAAAATTATGGTTAGTCACTGTTGGAGGAGCTTTCAGTTATTCCCTCATCCTTCTTCGTTCCAATTTGGATCCTCAACCAAGGAACGGGTATCATGGACTTCGACACCAAGATCATGTAGTGGTTGAAATTGGTTCGCATTCACAGCCACAAGGAGTCAGTCATAGTGTTACTCCAGTGAATTCACCCCAATCAACTATCGCTAGTTCACAACCACACCCAGTCATTGATATGGTTTGGCCTTCAACAGGGACAACACATACGGCTTCTCGAGTAGTTTCAACTCCAGAGGGTGGCGCTGGTGGTGTCCCTCAAGAAAACATTGATGATACGAAGGAATGCTTCATGAGTTGCATAGAGGCTCTTAAGAAGGAGAGTGAGAGCGTTATCAGCACAATTTTCATGCATGTAGACAAATACCTTAAAGCTAATATTCTCAGTAGGGACAAAATTTCAGAGTCGCTGCCGGTGACCGACTTCGACATTGTCATCGACGCGCTGCCGCCGGGGACGGTCAACGAACTCCGCGAGACCGCGAAGCGAATGGTGGCCGGTGGGTTGGGTAAGGAGTGCTCGAACGTGTACAGCAGTTGCCGTAGGGAGTTCCTGGAGGAGAGCGTGTCGAGGTTAGGGTTAATGAAGCTTAGCATAGAGGACGTTGAAAAGATGACGTGGGAGGACCTTAAAGATGAAATAGAGAAATGGATTAAAGCCTCGAACGTCGCTCTCAAGATCCTCTTCCCCAGCGAGCGGCGTCTCTGTGACCGCGTTTTCTTCGGATTCGCCTCCGTCGTGGATTTTACCTTTATGGAGGTTTGCCGCGGATCCGCAATTCAGTTGCTAGATTTCGCCAACGCAGTCGCGGTCGGGAGCCGGTCGCCGGAATGGCTGTTCAGTATCCTCGACGTGTTCGAGACGCTGCGTGACCTAATTCCCGAATTTGAGGCTCTGTTTTCTGATCAGTTGAGCATCTCGCTCAGGCACGAGGTGATTACTATTTGGAAGAGGCTGGGGGAATCGATTAGGGGCATTTTTATGGGACTGGAGAATTTAGTTCGCCGGGATCCCGCAAAGACTGCGGTTCCTGGTGGCGGTCTTCACCCGATTACTCGCTTCGTGATGAACTACCTCCGTGCGGCGTGCCGGTCACGGCAGAGCTTGGAGCAGGCTTTTGAAGAATACGGGTTGAAAGAGTACCCAAAGCTTGATGATAGAGCTCACTCATCTTGTTCTTTATCAGAGGAAATGAATTGGATTATGGAGCTATTAGAGAGCAATTTGGAAGCGAAGTCGAAGATTTACAAGGACCCTGCTTTGTGCTATGTTTTCTTGATGAATAATGGGAGGTATATTGTTCAAAAGGCCAAAGATAGTGAACTAGGAACCCTCTTGGGAGATGACTGGATCAGAAAACACGCTGCAAAAGTTCAACAATTCCATGTGCACTATCAAAGAAGCTCGTGGGGGAGGGTATTGGGAATTCTGAACCTGGATAGTACTGTCTCACTGCCCCCTAATGCCTTAGCAAGGTCACTGAAGGAGAAGCTTAAGTCGTTTAACACGATGTTTGATTATATTTGCAAGGAACAGTCTTCCTGGTTTGTTTTTGATGAACAGCTCAGGGAAGAAATAAGAATTTCTCGAGAGAAAATCTTGTTGCCTGCGTATGTAAACTTCATAGTTAGGTTCCAGAATGTTCCAGAGATCGGTAAGGACGCTGATAAGTATATCAAGTATGTGACAGAGGACATTCATGCCAAACTCAACGAATTATGTCACGAATCAATTGTTATTGATATGGTTCGGCCTTCAAGAGGAACATCACGTAATTCTTCAAAAGTAGTTTTACCTCAAGAGGGTGGTGCTGGTGGTGCCCCCGAGAAAGCATTGATGGTACTAAGGCATGCTTCATGGGTTGTATAG 2205 0.4621 MLFKIQSWLHQPKTWQYSNSRCLEAHTAFSILLITSIYSFFLDKDVKQRPDVYSLVSYVAFAIMSLGLSRLSQLGFEVDLLYFFCALLTVQLMKVKLWLVTVGGAFSYSLILLRSNLDPQPRNGYHGLRHQDHVVVEIGSHSQPQGVSHSVTPVNSPQSTIASSQPHPVIDMVWPSTGTTHTASRVVSTPEGGAGGVPQENIDDTKECFMSCIEALKKESESVISTIFMHVDKYLKANILSRDKISESLPVTDFDIVIDALPPGTVNELRETAKRMVAGGLGKECSNVYSSCRREFLEESVSRLGLMKLSIEDVEKMTWEDLKDEIEKWIKASNVALKILFPSERRLCDRVFFGFASVVDFTFMEVCRGSAIQLLDFANAVAVGSRSPEWLFSILDVFETLRDLIPEFEALFSDQLSISLRHEVITIWKRLGESIRGIFMGLENLVRRDPAKTAVPGGGLHPITRFVMNYLRAACRSRQSLEQAFEEYGLKEYPKLDDRAHSSCSLSEEMNWIMELLESNLEAKSKIYKDPALCYVFLMNNGRYIVQKAKDSELGTLLGDDWIRKHAAKVQQFHVHYQRSSWGRVLGILNLDSTVSLPPNALARSLKEKLKSFNTMFDYICKEQSSWFVFDEQLREEIRISREKILLPAYVNFIVRFQNVPEIGKDADKYIKYVTEDIHAKLNELCHESIVIDMVRPSRGTSRNSSKVVLPQEGGAGGAPEKALMVLRHASWVV 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01940 734 MobiDBLite consensus disorder prediction 698 717 - -
Viun8g01940 734 Gene3D Exocyst complex component Exo70 197 690 - -
Viun8g01940 734 Pfam Exo70 exocyst complex subunit 328 684 IPR046364 GO:0000145|GO:0005546|GO:0006887
Viun8g01940 734 SUPERFAMILY Cullin repeat-like 233 685 IPR016159 -
Viun8g01940 734 PANTHER EXOCYST COMPLEX PROTEIN EXO70 203 684 IPR004140 GO:0000145|GO:0006887
Viun8g01940 734 MobiDBLite consensus disorder prediction 143 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01940 Viun-Chr8 29985639 29988900 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01940 244 685 EXO70 exocyst subunit family AT5G58430 68.326 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01940 K07195 - gmx:100803694 747.658