Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01939 ATGCTCTTCAAAATTCAGAGTTGGCTACATCAGCCAAAGGTATGGAGATTTGTGTGTTTTTGTTCCTCTATTGTTGGACTTGTCTGCTATGCCTTCAGTTCCTTTTTCAATCATTTAATTGGAAATTGGAGCTGGTGGAAGATCTTTCTTTACATTGTTTTCAGTTTCTTAATCTCCCTTTCCACCTTGTTTGCAAAGACATGGCAGTACTCCAACTCTCGCTGTTTGGAAGCTCACACAGCGTTTTCTATTTTGCTGATCACTTCTATATACTCTTTTTTCCTTGATAAAGATGTGAAACAGAGACCAGATGTATATAGTCTGGTTTCCTATGTTGCATTTGCTATCATGTCTTTGGGCTTGTCAAGGCTGAGTCAGTTAGGATTTGAGGTTGATCTCCTCTATTTTTTCTGTGCACTTCTGACTGTACAACTCATGAAAGTAAAATTATGGTTAGTCACTGTTGGAGGAGCTTTCAGTTATTCCCTCATCCTTCTTCGTTCCAATTTGGATCCTCAACCAAGGAACGGGTATCATGGACTTCGACACCAAGATCATGTAGTGGTTGAAATTGGTTCGCATTCACAGCCACAAGGAGTCAGTCATAGTGTTACTCCAGTGAATTCACCCCAATCAACTATCGCTAGTTCACAACCACACCCAGTCATTGATATGGTTTGGCCTTCAACAGGGACAACACATACGGCTTCTCGAGTAGTTTCAACTCCAGAGGGTGGCGCTGGTGGTGTCCCTCAAGAAAACATTGATGATACGAAGGAATGCTTCATGAGTTGCATAGAGGCTCTTAAGAAGGAGAGTGAGAGCGTTATCAGCACAATTTTCATGCATGTAGACAAATACCTTAAAGCTAATATTCTCAGTAGGGACAAAATTTCAGAGTCGCTGCCGGTGACCGACTTCGACATTGTCATCGACGCGCTGCCGCCGGGGACGGTCAACGAACTCCGCGAGACCGCGAAGCGAATGGTGGCCGGTGGGTTGGGTAAGGAGTGCTCGAACGTGTACAGCAGTTGCCGTAGGGAGTTCCTGGAGGAGAGCGTGTCGAGGTTAGGGTTAATGAAGCTTAGCATAGAGGACGTTGAAAAGATGACGTGGGAGGACCTTAAAGATGAAATAGAGAAATGGATTAAAGCCTCGAACGTCGCTCTCAAGATCCTCTTCCCCAGCGAGCGGCGTCTCTGTGACCGCGTTTTCTTCGGATTCGCCTCCGTCGTGGATTTTACCTTTATGGAGGTTTGCCGCGGATCCGCAATTCAGTTGCTAGATTTCGCCAACGCAGTCGCGGTCGGGAGCCGGTCGCCGGAATGGCTGTTCAGTATCCTCGACGTGTTCGAGACGCTGCGTGACCTAATTCCCGAATTTGAGGCTCTGTTTTCTGATCAGTTGAGCATCTCGCTCAGGCACGAGGTGATTACTATTTGGAAGAGGCTGGGGGAATCGATTAGGGGCATTTTTATGGGACTGGAGAATTTAGTTCGCCGGGATCCCGCAAAGACTGCGGTTCCTGGTGGCGGTCTTCACCCGATTACTCGCTTCGTGATGAACTACCTCCGTGCGGCGTGCCGGTCACGGCAGAGCTTGGAGCAGGCTTTTGAAGAATACGGGTTGAAAGAGTACCCAAAGCTTGATGATAGAGCTCACTCATCTTGTTCTTTATCAGAGGAAATGAATTGGATTATGGAGCTATTAGAGAGCAATTTGGAAGCGAAGTCGAAGATTTACAAGGACCCTGCTTTGTGCTATGTTTTCTTGATGAATAATGGGAGGTATATTGTTCAAAAGGCCAAAGATAGTGAACTAGGAACCCTCTTGGGAGATGACTGGATCAGAAAACACGCTGCAAAAGTTCAACAATTCCATGTGCACTATCAAAGAAGCTCGTGGGGGAGGGTATTGGGAATTCTGAACCTGGATAGTACTGTCTCACTGCCCCCTAATGCCTTAGCAAGGTCACTGAAGGAGAAGCTTAAGTCGTTTAACACGATGTTTGATTATATTTGCAAGGAACAGTCTTCCTGGTTTGTTTTTGATGAACAGCTCAGGGAAGAAATAAGAATTTCTCGAGAGAAAATCTTGTTGCCTGCGTATGTAAACTTCATAGTTAGGTTCCAGAATGTTCCAGAGATCGGTAAGGACGCTGATAAGTATATCAAGTATGTGACAGAGGACATTCATGCCAAACTCAACGAATTATGTCACGAATCAATTGTTATTGATATGGTTCGGCCTTCAAGAGGAACATCACGTAATTCTTCAAAAGTAGTTTTACCTCAAGAGGGTGGTGCTGGTGGTGCCCCCGAGAAAGCATTGATGGTACTAAGGCATGCTTCATGGGTTGTATAG 2364 0.4556 MLFKIQSWLHQPKVWRFVCFCSSIVGLVCYAFSSFFNHLIGNWSWWKIFLYIVFSFLISLSTLFAKTWQYSNSRCLEAHTAFSILLITSIYSFFLDKDVKQRPDVYSLVSYVAFAIMSLGLSRLSQLGFEVDLLYFFCALLTVQLMKVKLWLVTVGGAFSYSLILLRSNLDPQPRNGYHGLRHQDHVVVEIGSHSQPQGVSHSVTPVNSPQSTIASSQPHPVIDMVWPSTGTTHTASRVVSTPEGGAGGVPQENIDDTKECFMSCIEALKKESESVISTIFMHVDKYLKANILSRDKISESLPVTDFDIVIDALPPGTVNELRETAKRMVAGGLGKECSNVYSSCRREFLEESVSRLGLMKLSIEDVEKMTWEDLKDEIEKWIKASNVALKILFPSERRLCDRVFFGFASVVDFTFMEVCRGSAIQLLDFANAVAVGSRSPEWLFSILDVFETLRDLIPEFEALFSDQLSISLRHEVITIWKRLGESIRGIFMGLENLVRRDPAKTAVPGGGLHPITRFVMNYLRAACRSRQSLEQAFEEYGLKEYPKLDDRAHSSCSLSEEMNWIMELLESNLEAKSKIYKDPALCYVFLMNNGRYIVQKAKDSELGTLLGDDWIRKHAAKVQQFHVHYQRSSWGRVLGILNLDSTVSLPPNALARSLKEKLKSFNTMFDYICKEQSSWFVFDEQLREEIRISREKILLPAYVNFIVRFQNVPEIGKDADKYIKYVTEDIHAKLNELCHESIVIDMVRPSRGTSRNSSKVVLPQEGGAGGAPEKALMVLRHASWVV 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01939 787 PANTHER EXOCYST COMPLEX PROTEIN EXO70 256 737 IPR004140 GO:0000145|GO:0006887
Viun8g01939 787 SUPERFAMILY Cullin repeat-like 286 738 IPR016159 -
Viun8g01939 787 Gene3D Exocyst complex component Exo70 250 743 - -
Viun8g01939 787 MobiDBLite consensus disorder prediction 751 770 - -
Viun8g01939 787 Pfam Exo70 exocyst complex subunit 381 737 IPR046364 GO:0000145|GO:0005546|GO:0006887
Viun8g01939 787 MobiDBLite consensus disorder prediction 196 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01939 Viun-Chr8 29985638 29988900 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01939 297 738 EXO70 exocyst subunit family AT5G58430 68.326 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01939 K07195 - gmx:100803694 747.658