Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01930 ATGGGGATATATCTCAGCGCTCCCAAAACAGAGAAGGCATCTGAAGATGGCGAGAACGACAAGCTGCGGTTCGGTTTGTCTTCCATGCAGGGTTGGCGGGCTTCCATGGAAGATGCTCATGCAGCTATCCCATATTTGGACGAGTCTACATCTTACTTTGGCGTTTATGATGGCCATGGAGGCAAAGCAGTTTCTAAATTCTGTGCCAAGTATCTACACCAGCAGGTGCTGAAGAGTGAATCTTACCAAGCTGGAGATATAAGCACATCTTTACAAAAATCTTTTCTTAGAATGGATGAGATGATGCGTGGACAAAGAGGGTGGAGAGAATTAGCAGTCTTGGGGGATAAAATAGAAAAGTTATCTGGTATGTTAGAGGGCTTTATTTGGTCTCCCAGGAGCAGTGAAGCCAATGAGAGTATCGATGATTGGGCATTTGAGGAGGGACCCCATTCTGATTTTACTGGACCAAACTCTGGAAGCACAGCTTGTGTAGCTGTTATCCGAGGAAAGAAACTTGTTGTTGGTAATGCTGGAGATTCTAGATGCGTCTTGTCAAGGAAAGGCCAGGCACACAATTTATCTAAGGATCACAAGCCTGATCTTGAGGCTGAGAAAGACAGGATTCTAAAAGCTGGTGGTTTCATTCAAGTTGGACGGGTCAATGGAAGTTTAAACTTGGCTAGAGCAATTGGAGATATGGAGTTCAAGCAGAACAAGTATTTGCCTGCCGAAAAGCAGATCGTGACTGCTGATCCGGACGTAACTTCAGTTGAACTTTGTGATGATGATGAATTCCTTGTGTTAGCCTGTGATGGAATATGGGATTGCATGTCTAGCCAACAGCTTGTGGACTTCATACATCAACAGTTAAAGACGGAGAATAAACTTTCTGCGGTTTGTGAGAAAGTGTTTGATAGGTGCTTGGCACCAACAGCTGGTGGTGAGGGATGTGATAACATGACCATGATCTTGATTCAGTTCAAAAAACCTTCCAGCGCTGATGTTTCTGCCACGAACCAGCCCCAATCGTCTGCTCAACCACCTGAAACCGATAAAAGTTCAGAGAAAAAAGTAGAGAAAAAGGTAGAATCGAAGTGA 1101 0.4432 MGIYLSAPKTEKASEDGENDKLRFGLSSMQGWRASMEDAHAAIPYLDESTSYFGVYDGHGGKAVSKFCAKYLHQQVLKSESYQAGDISTSLQKSFLRMDEMMRGQRGWRELAVLGDKIEKLSGMLEGFIWSPRSSEANESIDDWAFEEGPHSDFTGPNSGSTACVAVIRGKKLVVGNAGDSRCVLSRKGQAHNLSKDHKPDLEAEKDRILKAGGFIQVGRVNGSLNLARAIGDMEFKQNKYLPAEKQIVTADPDVTSVELCDDDEFLVLACDGIWDCMSSQQLVDFIHQQLKTENKLSAVCEKVFDRCLAPTAGGEGCDNMTMILIQFKKPSSADVSATNQPQSSAQPPETDKSSEKKVEKKVESK 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01930 366 CDD PP2Cc 23 328 IPR001932 -
Viun8g01930 366 ProSiteProfiles PPM-type phosphatase domain profile. 23 328 IPR001932 -
Viun8g01930 366 PANTHER PROTEIN PHOSPHATASE 2C 17 327 IPR015655 GO:0004722|GO:0006470
Viun8g01930 366 MobiDBLite consensus disorder prediction 351 366 - -
Viun8g01930 366 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Viun8g01930 366 SUPERFAMILY PP2C-like 3 330 IPR036457 -
Viun8g01930 366 Gene3D - 1 329 IPR036457 -
Viun8g01930 366 SMART PP2C_4 13 326 IPR001932 -
Viun8g01930 366 Pfam Protein phosphatase 2C 23 104 IPR001932 -
Viun8g01930 366 Pfam Protein phosphatase 2C 140 313 IPR001932 -
Viun8g01930 366 Coils Coil 356 366 - -
Viun8g01930 366 MobiDBLite consensus disorder prediction 334 366 - -
Viun8g01930 366 MobiDBLite consensus disorder prediction 334 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01930 Viun-Chr8 29885390 29893767 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01930 1 336 PP2C-type Phosphatase Gene Family AT2G25070 76.261 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01930 K17499 - gmx:100776787 669.848