Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01880 ATGGCATCACTGTGTTTAAACTCATTTCCAGTTCCACCATCATCTCTTCCTCGCAAGCCAACAGAAACTTCTCTTTCTTCTTCTTCTCATCCTTCTTTGCTTCTTGATAGCAACGACAACAACTACAATCACAGTGCTTTGAAACCCATTGTTGTCAGTGGAGACCCCCCAACTTTTGTTTCTGCTCCTGGTCGCAGAATTCTTGCAGTTGGAGATCTACATGGAGATATTAAGCAAGCTAGGTCTGCTCTTGAAATGGCTGGTGTATTGAGCTCTGATGGTCAAGATTTGTGGACTGGTGGAGAAACTGTGTTGGTTCAACTTGGTGATATACTTGATCGAGGTGAAGATGAAATTGCTATCTTATCCTTGCTGCGATCGTTGGATAAACAGGCAAAAGCAAAAGGTGGAGCTGTGTTTCAGGTAAATGGAAATCACGAGACCATGAATGTGGAAGGGGATTTCAGATATGTTGATTCTGGAGGATTTGATGAGTGTAATGATTTCTTAGAATATATCAATGGTTCTGAAGATGACTGGGAACAAACCTTTACTTCTTGGGTTGATGTCTCTGAAAGGTGGAAAGAAGATCGGACAATGTCAAAAGGTTATTGGGGACCTTGGAATTTAATGAAGAGGCAAAAGGGGGTCATAGCGAGATCAGTCCTCTTTAGGCCCGGTGGGCTTCTTGCACGTGAGCTTGCAAGGCATGCTGTTGTACTAAAGGTCAATGACTGGCTCTTCTGCCATGGTGGACTTCTTCCTCACCATGTTGCATATGGTTTAGAGAGGATAAATAAAGAAGTGTCTGAGTGGATGAGAGGTCAGCATGAGAACGATAATGCTTCCAAAATGCCTTTCATTGCCACTAGGGGTTATGATAGTGTTGTTTGGAATCGTTTATACTCAAGAGATGCACCAGATTTGGTGGACTATCAGGCTAAACAGGTGAGTTCCATTCTTGACGAGACACTGCAAGCAGTTGGTGCTAAGTCAATGGTGGTCGGGCATACTCCTCAAACTACAGGTGTAAATTGTAAATACAATTGTAGCATATGGCGTATAGATGTTGGAATGTCCAGTGGAGTTCTTAATTCAAGACCAGAGGTTCTAGAAATTATAGACAATCAAGCAAGAGTTATAAGGTGCAAAAGGGACAGACACGGTGAACTTCAAGCTGTTGCATATACCTAA 1194 0.4255 MASLCLNSFPVPPSSLPRKPTETSLSSSSHPSLLLDSNDNNYNHSALKPIVVSGDPPTFVSAPGRRILAVGDLHGDIKQARSALEMAGVLSSDGQDLWTGGETVLVQLGDILDRGEDEIAILSLLRSLDKQAKAKGGAVFQVNGNHETMNVEGDFRYVDSGGFDECNDFLEYINGSEDDWEQTFTSWVDVSERWKEDRTMSKGYWGPWNLMKRQKGVIARSVLFRPGGLLARELARHAVVLKVNDWLFCHGGLLPHHVAYGLERINKEVSEWMRGQHENDNASKMPFIATRGYDSVVWNRLYSRDAPDLVDYQAKQVSSILDETLQAVGAKSMVVGHTPQTTGVNCKYNCSIWRIDVGMSSGVLNSRPEVLEIIDNQARVIRCKRDRHGELQAVAYT 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01880 397 MobiDBLite consensus disorder prediction 1 37 - -
Viun8g01880 397 CDD MPP_Shelphs 68 370 IPR041787 -
Viun8g01880 397 Pfam Calcineurin-like phosphoesterase 66 228 IPR004843 GO:0016787
Viun8g01880 397 Gene3D - 21 392 IPR029052 -
Viun8g01880 397 SUPERFAMILY Metallo-dependent phosphatases 58 359 IPR029052 -
Viun8g01880 397 PANTHER SHEWANELLA-LIKE PROTEIN PHOSPHATASE 1 20 389 - -
Viun8g01880 397 MobiDBLite consensus disorder prediction 18 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01880 Viun-Chr8 29567805 29573144 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01880 - - gmx:100804302 722.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g01129 6 20640716 20643991 Viun8g01880 8 29567805 29573144 PCT