Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01874 ATGGACACTCTCTGTTTGTGGTGGGTGAATGGTTGGATGCAAACCTTCATACTCAATCAAATACTGAGATGGCTGAAGAAACCAAAGGTAGTGAGACTTGTATGTCTTGTTTCATCTGTCGTTGGACTGTTCTGTTATGCACTCAGTTCCTCTTTTAACCATTTACTGGGAAGCTGGAGCTGGTGGAAGATGCTTCTTTATATTCTTTTCAGTTCAATCACTTGCCTTGCCGTCTTGTTCACACCGGCAAGGTCGAGCTCCTCCTCACACCGGTTGGAATTTCATTTTGCATTTTTGGTTCTAACAGTCACTTCTCTTTATTCCTTTTTGTTTGATAATGTGGTGAAGGGTAAACCAGATGCATACAGCCTGATCTCTTGCGCTGCTTTTGCTACCATGTCGCTTGGATTGTCTAATCTTACTCAATTTGGATTTCAGATCGATTTGCTATATTTCTTCTGTGGAGGTCTAACAGTACAACTCATGAAAATCAAACTGTGGTTAGTCGTCGTTGGAGGGGGCTTCAGTTATTCCCTCCTTCAGCTTCGTGACTATCCGAGCGACAGACAAGGGGAGAATCTTCAGCTCCAAGTCCAAAATCAAGTAATCATTCAAGTTGATGATTCGGGGAGTGTTAGTAGTAGCAGTCCTGTTACCATGTCACAACAAGCTAATGCTGATGTTGAAAGTACTCTTGGTACCTCACCAGAAGATGGGGATTTCAGATTCCAAGATCATCTACTCACTCAAAGCAATTCACCCTCACAAGATGGAAGTGTTGATGATGTTCTTATCATCCAACAACAACTCATGAATTGTGTAAAGGAGCTTGAGAAGGAGAATCAGAGGCTTGTTCCCATGGTTTGTAGCCACGTGGAGAAATACCTTAAAGTCGTGTTTGATTCCAAAGAAGTACCACATCCTGACGTAAACTTGGTGATGGATGCACTTCCATCGGGAATTATGGGACGCCTTAAGGAAAACGTGAAGCTGATGGTGGAAGCAGGTTTTACAGAGGAATGCAGCGACATCTACAGCAAATGGCGAAGGGAGTTTTTAAAACAGTGTCTGCAGGCACTTAGGTTGCAATTTGAAACGCCCAACAATGAGGACGTTGAGAAGTGGTTAAAAACGTGCAAGGCAGCTGGGAAAATACTTTTTCCCAATGAAAGGAGACTCTGTGATTACCTCTTTTCCAGGTTCTCCGTCGCTGCTGCGGATGTCTCCTTCGAAAAAGTTTGCAAGGAACTGACGATTAATGTAGTGAATTTTGCCGATACTACCATAACAACTGGGACCTATTTGCCGAATCTTTTGTTCAACATCGTCCCTAAAATGTCGGAATCATTGGGCGAGCTGATACAGGACTTCATCTCACCGGCTTTGTTTGACAAATTGTCGTTTGTAGATGATATTGAAGATGTTCGGCAAAGATTGGCTACCGTAAACAGGGTGGGGAATATTATTTACCATACTACTGTGCAGGCACCTGTTACCGACGGAGGGCTTCATCTGATTACAAAGGAAGTAATGAAACATATCCTTGGATTTTGTGATTTTAAGTTAGAGCCGGCTGCCCTATCTTATCGCGTCAGAATTGCTTCCTTTTGGGTGGTGATAGGAAAAATGGTTGAGTTGTTAGAGAGCGAATTGGAAGTCAAGTCTAAAGACTACTACGCTGACCCCGCATTGGGCTTTGTTTTTATGCTCAATAATCTTAACTACATAGCCCAAAAGACGAAGTTTTTGAAAATGGATGATGATTGGTTTCGACGAAACAGGGCAAAGGTACAGCAAAAGCGCAACTTGTATCTAAGAAGGTCGTGGAACAAGATTGTGGAGTTTTTGAAGATTGGGAAAAATGAGTCGGCGGAAGCTGATGTGGTAGCGGAGTTGATGAAAGAAAAGCTGCATTTGTTCAACCTGCATTTTGAGGAGACATGCACAACACAATCTACATGGACTGTCTCTGATATGCAACTGAAGCGACGAATAATAAAATCCATAGAAGAGTTTTTGTTGCCACAATATGGAAAGTTTTGTGACAGGTTTCGAGTTGTTTTTGGTAATCAAGCTTATCATTATATTAAGTTTGGATTTCTAGACATTCAAAATTGTCTCAACCATTTGTTTCTTCTAGATGAGGAGATGAATACGAAAGACAAGAAAAACATATGA 2178 0.4178 MDTLCLWWVNGWMQTFILNQILRWLKKPKVVRLVCLVSSVVGLFCYALSSSFNHLLGSWSWWKMLLYILFSSITCLAVLFTPARSSSSSHRLEFHFAFLVLTVTSLYSFLFDNVVKGKPDAYSLISCAAFATMSLGLSNLTQFGFQIDLLYFFCGGLTVQLMKIKLWLVVVGGGFSYSLLQLRDYPSDRQGENLQLQVQNQVIIQVDDSGSVSSSSPVTMSQQANADVESTLGTSPEDGDFRFQDHLLTQSNSPSQDGSVDDVLIIQQQLMNCVKELEKENQRLVPMVCSHVEKYLKVVFDSKEVPHPDVNLVMDALPSGIMGRLKENVKLMVEAGFTEECSDIYSKWRREFLKQCLQALRLQFETPNNEDVEKWLKTCKAAGKILFPNERRLCDYLFSRFSVAAADVSFEKVCKELTINVVNFADTTITTGTYLPNLLFNIVPKMSESLGELIQDFISPALFDKLSFVDDIEDVRQRLATVNRVGNIIYHTTVQAPVTDGGLHLITKEVMKHILGFCDFKLEPAALSYRVRIASFWVVIGKMVELLESELEVKSKDYYADPALGFVFMLNNLNYIAQKTKFLKMDDDWFRRNRAKVQQKRNLYLRRSWNKIVEFLKIGKNESAEADVVAELMKEKLHLFNLHFEETCTTQSTWTVSDMQLKRRIIKSIEEFLLPQYGKFCDRFRVVFGNQAYHYIKFGFLDIQNCLNHLFLLDEEMNTKDKKNI 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01874 725 PANTHER EXOCYST COMPLEX PROTEIN EXO70 265 711 IPR004140 GO:0000145|GO:0006887
Viun8g01874 725 SUPERFAMILY Cullin repeat-like 278 711 IPR016159 -
Viun8g01874 725 Gene3D Exocyst complex component Exo70 245 720 - -
Viun8g01874 725 Pfam Exo70 exocyst complex subunit 374 708 IPR046364 GO:0000145|GO:0005546|GO:0006887
Viun8g01874 725 MobiDBLite consensus disorder prediction 209 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01874 Viun-Chr8 29519882 29522369 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01874 306 711 EXO70 exocyst subunit family AT5G58430 38.409 5.90e-74 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01874 - - vra:106752607 918.687