Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01873 ATGGACACTCTCTGTTTGTGGTGGGTGAATGGTTGGATGCAAACCTTCATACTCAATCAAATACTGAGATGGCTGAAGAAACCAAAGATCGATTTGCTATATTTCTTCTGTGGAGGTCTAACAGTACAACTCATGAAAATCAAACTGTGGTTAGTCGTCGTTGGAGGGGGCTTCAGTTATTCCCTCCTTCAGCTTCGTGACTATCCGAGCGACAGACAAGGGGAGAATCTTCAGCTCCAAGTCCAAAATCAAGTAATCATTCAAGTTGATGATTCGGGGAGTGTTAGTAGTAGCAGTCCTGTTACCATGTCACAACAAGCTAATGCTGATGTTGAAAGTACTCTTGGTACCTCACCAGAAGATGGGGATTTCAGATTCCAAGATCATCTACTCACTCAAAGCAATTCACCCTCACAAGATGGAAGTGTTGATGATGTTCTTATCATCCAACAACAACTCATGAATTGTGTAAAGGAGCTTGAGAAGGAGAATCAGAGGCTTGTTCCCATGGTTTGTAGCCACGTGGAGAAATACCTTAAAGTCGTGTTTGATTCCAAAGAAGTACCACATCCTGACGTAAACTTGGTGATGGATGCACTTCCATCGGGAATTATGGGACGCCTTAAGGAAAACGTGAAGCTGATGGTGGAAGCAGGTTTTACAGAGGAATGCAGCGACATCTACAGCAAATGGCGAAGGGAGTTTTTAAAACAGTGTCTGCAGGCACTTAGGTTGCAATTTGAAACGCCCAACAATGAGGACGTTGAGAAGTGGTTAAAAACGTGCAAGGCAGCTGGGAAAATACTTTTTCCCAATGAAAGGAGACTCTGTGATTACCTCTTTTCCAGGTTCTCCGTCGCTGCTGCGGATGTCTCCTTCGAAAAAGTTTGCAAGGAACTGACGATTAATGTAGTGAATTTTGCCGATACTACCATAACAACTGGGACCTATTTGCCGAATCTTTTGTTCAACATCGTCCCTAAAATGTCGGAATCATTGGGCGAGCTGATACAGGACTTCATCTCACCGGCTTTGTTTGACAAATTGTCGTTTGTAGATGATATTGAAGATGTTCGGCAAAGATTGGCTACCGTAAACAGGGTGGGGAATATTATTTACCATACTACTGTGCAGGCACCTGTTACCGACGGAGGGCTTCATCTGATTACAAAGGAAGTAATGAAACATATCCTTGGATTTTGTGATTTTAAGTTAGAGCCGGCTGCCCTATCTTATCGCGTCAGAATTGCTTCCTTTTGGGTGGTGATAGGAAAAATGGTTGAGTTGTTAGAGAGCGAATTGGAAGTCAAGTCTAAAGACTACTACGCTGACCCCGCATTGGGCTTTGTTTTTATGCTCAATAATCTTAACTACATAGCCCAAAAGACGAAGTTTTTGAAAATGGATGATGATTGGTTTCGACGAAACAGGGCAAAGGTACAGCAAAAGCGCAACTTGTATCTAAGAAGGTCGTGGAACAAGATTGTGGAGTTTTTGAAGATTGGGAAAAATGAGTCGGCGGAAGCTGATGTGGTAGCGGAGTTGATGAAAGAAAAGCTGCATTTGTTCAACCTGCATTTTGAGGAGACATGCACAACACAATCTACATGGACTGTCTCTGATATGCAACTGAAGCGACGAATAATAAAATCCATAGAAGAGTTTTTGTTGCCACAATATGGAAAGTTTTGTGACAGGTTTCGAGTTGTTTTTGGTAATCAAGCTTATCATTATATTAAGTTTGGATTTCTAGACATTCAAAATTGTCTCAACCATTTGTTTCTTCTAGATGAGGAGATGAATACGAAAGACAAGAAAAACATATGA 1827 0.4171 MDTLCLWWVNGWMQTFILNQILRWLKKPKIDLLYFFCGGLTVQLMKIKLWLVVVGGGFSYSLLQLRDYPSDRQGENLQLQVQNQVIIQVDDSGSVSSSSPVTMSQQANADVESTLGTSPEDGDFRFQDHLLTQSNSPSQDGSVDDVLIIQQQLMNCVKELEKENQRLVPMVCSHVEKYLKVVFDSKEVPHPDVNLVMDALPSGIMGRLKENVKLMVEAGFTEECSDIYSKWRREFLKQCLQALRLQFETPNNEDVEKWLKTCKAAGKILFPNERRLCDYLFSRFSVAAADVSFEKVCKELTINVVNFADTTITTGTYLPNLLFNIVPKMSESLGELIQDFISPALFDKLSFVDDIEDVRQRLATVNRVGNIIYHTTVQAPVTDGGLHLITKEVMKHILGFCDFKLEPAALSYRVRIASFWVVIGKMVELLESELEVKSKDYYADPALGFVFMLNNLNYIAQKTKFLKMDDDWFRRNRAKVQQKRNLYLRRSWNKIVEFLKIGKNESAEADVVAELMKEKLHLFNLHFEETCTTQSTWTVSDMQLKRRIIKSIEEFLLPQYGKFCDRFRVVFGNQAYHYIKFGFLDIQNCLNHLFLLDEEMNTKDKKNI 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01873 608 PANTHER EXOCYST COMPLEX PROTEIN EXO70 148 594 IPR004140 GO:0000145|GO:0006887
Viun8g01873 608 SUPERFAMILY Cullin repeat-like 161 594 IPR016159 -
Viun8g01873 608 Pfam Exo70 exocyst complex subunit 257 591 IPR046364 GO:0000145|GO:0005546|GO:0006887
Viun8g01873 608 Gene3D Exocyst complex component Exo70 127 603 - -
Viun8g01873 608 MobiDBLite consensus disorder prediction 92 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01873 Viun-Chr8 29519882 29522369 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01873 189 594 EXO70 exocyst subunit family AT5G58430 38.409 2.36e-75 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01873 - - vra:106752607 781.171