Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01872 ATGAAAATCAAACTGTGGTTAGTCGTCGTTGGAGGGGGCTTCAGTTATTCCCTCCTTCAGCTTCGTGACTATCCGAGCGACAGACAAGGGGAGAATCTTCAGCTCCAAGTCCAAAATCAAGTAATCATTCAAGTTGATGATTCGGGGAGTGTTAGTAGTAGCAGTCCTGTTACCATGTCACAACAAGCTAATGCTGATGTTGAAAGTACTCTTGGTACCTCACCAGAAGATGGGGATTTCAGATTCCAAGATCATCTACTCACTCAAAGCAATTCACCCTCACAAGATGGAAGTGTTGATGATGTTCTTATCATCCAACAACAACTCATGAATTGTGTAAAGGAGCTTGAGAAGGAGAATCAGAGGCTTGTTCCCATGGTTTGTAGCCACGTGGAGAAATACCTTAAAGTCGTGTTTGATTCCAAAGAAGTACCACATCCTGACGTAAACTTGGTGATGGATGCACTTCCATCGGGAATTATGGGACGCCTTAAGGAAAACGTGAAGCTGATGGTGGAAGCAGGTTTTACAGAGGAATGCAGCGACATCTACAGCAAATGGCGAAGGGAGTTTTTAAAACAGTGTCTGCAGGCACTTAGGTTGCAATTTGAAACGCCCAACAATGAGGACGTTGAGAAGTGGTTAAAAACGTGCAAGGCAGCTGGGAAAATACTTTTTCCCAATGAAAGGAGACTCTGTGATTACCTCTTTTCCAGGTTCTCCGTCGCTGCTGCGGATGTCTCCTTCGAAAAAGTTTGCAAGGAACTGACGATTAATGTAGTGAATTTTGCCGATACTACCATAACAACTGGGACCTATTTGCCGAATCTTTTGTTCAACATCGTCCCTAAAATGTCGGAATCATTGGGCGAGCTGATACAGGACTTCATCTCACCGGCTTTGTTTGACAAATTGTCGTTTGTAGATGATATTGAAGATGTTCGGCAAAGATTGGCTACCGTAAACAGGGTGGGGAATATTATTTACCATACTACTGTGCAGGCACCTGTTACCGACGGAGGGCTTCATCTGATTACAAAGGAAGTAATGAAACATATCCTTGGATTTTGTGATTTTAAGTTAGAGCCGGCTGCCCTATCTTATCGCGTCAGAATTGCTTCCTTTTGGGTGGTGATAGGAAAAATGGTTGAGTTGTTAGAGAGCGAATTGGAAGTCAAGTCTAAAGACTACTACGCTGACCCCGCATTGGGCTTTGTTTTTATGCTCAATAATCTTAACTACATAGCCCAAAAGACGAAGTTTTTGAAAATGGATGATGATTGGTTTCGACGAAACAGGGCAAAGGTACAGCAAAAGCGCAACTTGTATCTAAGAAGGTCGTGGAACAAGATTGTGGAGTTTTTGAAGATTGGGAAAAATGAGTCGGCGGAAGCTGATGTGGTAGCGGAGTTGATGAAAGAAAAGCTGCATTTGTTCAACCTGCATTTTGAGGAGACATGCACAACACAATCTACATGGACTGTCTCTGATATGCAACTGAAGCGACGAATAATAAAATCCATAGAAGAGTTTTTGTTGCCACAATATGGAAAGTTTTGTGACAGGTTTCGAGTTGTTTTTGGTAATCAAGCTTATCATTATATTAAGTTTGGATTTCTAGACATTCAAAATTGTCTCAACCATTTGTTTCTTCTAGATGAGGAGATGAATACGAAAGACAAGAAAAACATATGA 1695 0.4177 MKIKLWLVVVGGGFSYSLLQLRDYPSDRQGENLQLQVQNQVIIQVDDSGSVSSSSPVTMSQQANADVESTLGTSPEDGDFRFQDHLLTQSNSPSQDGSVDDVLIIQQQLMNCVKELEKENQRLVPMVCSHVEKYLKVVFDSKEVPHPDVNLVMDALPSGIMGRLKENVKLMVEAGFTEECSDIYSKWRREFLKQCLQALRLQFETPNNEDVEKWLKTCKAAGKILFPNERRLCDYLFSRFSVAAADVSFEKVCKELTINVVNFADTTITTGTYLPNLLFNIVPKMSESLGELIQDFISPALFDKLSFVDDIEDVRQRLATVNRVGNIIYHTTVQAPVTDGGLHLITKEVMKHILGFCDFKLEPAALSYRVRIASFWVVIGKMVELLESELEVKSKDYYADPALGFVFMLNNLNYIAQKTKFLKMDDDWFRRNRAKVQQKRNLYLRRSWNKIVEFLKIGKNESAEADVVAELMKEKLHLFNLHFEETCTTQSTWTVSDMQLKRRIIKSIEEFLLPQYGKFCDRFRVVFGNQAYHYIKFGFLDIQNCLNHLFLLDEEMNTKDKKNI 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01872 564 MobiDBLite consensus disorder prediction 48 74 - -
Viun8g01872 564 Gene3D Exocyst complex component Exo70 83 559 - -
Viun8g01872 564 MobiDBLite consensus disorder prediction 48 71 - -
Viun8g01872 564 Pfam Exo70 exocyst complex subunit 213 547 IPR046364 GO:0000145|GO:0005546|GO:0006887
Viun8g01872 564 SUPERFAMILY Cullin repeat-like 117 550 IPR016159 -
Viun8g01872 564 PANTHER EXOCYST COMPLEX PROTEIN EXO70 104 550 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01872 Viun-Chr8 29519882 29522369 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01872 145 550 EXO70 exocyst subunit family AT5G58430 37.955 3.35e-76 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01872 - K07195 vra:106752607 749.969