Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01870 ATGGCTGAAACCTTGCTCTCTTACTTGAGAAAGAATCCAATGGCCATGCTCAGCAAAATTCTGAGATGGCTGAAGAAACCAAAGGTATGGAGAATTGTATCTCTTGCTTCATCTGTTGTTGGACTGCTCTGTTATGCGCTCAGTTCCTCTTTCAAACATTTGCTGGGAAACTGGAGCTGGTGGAAGATGCTTCTTTATATTGTTTTCAGTTTTATCATTTGTTTAGCCGTCTTGTTCACACCGGCAAGGTCAAGTTCCATCTCTTTCCGGCTGGAATCTCATTTGGCATTTCTGGTTCTTATAACCACGTCTGTTTGTTCCTTCTTGTTTGATAAAATGGTGAAGGGTAAACCAGATGCATACAGCGTCATCTCTTGGGCTGCTTTTGCAACCATGTCGCCTGGCTTGTCAAATCTCACTCAATTTGGATTCCAGATCGATCTACTATATTTCTTCTGCGGAGGTCTAACCGTACAACTCATGAAGATCAAATTGTGGTTAGTCACAGTTGGAGGGGGTTTCAGTTATTTCCTCCTCCAACTTCGTCACCATCCGAGCGACACAGACGGAGAGAACCTTCGGCTCCAGGACCAAAATCAAGTAATCATTCAAGTTAATGATTCAGGGATTGCTTTACTCACTCAAAGCAATTCACCTTCACAAGATGGAAGCGTTGATGATGGTTTTATCATAGGACAACAGCTCATAAATTGTATAGAGGAGCTTGAGAAGGAGAATGAGATGCTTGTTCCCATGTTTTGTAGACACATAGAGAAATACCTTACAAAGGTATTAATTGACCCTGAAGGAGTACCGAATCCTGACGTCAACTTGGTGATGGATGCACTTCCATCGGAAACTATGAGGCGCCTTAAGGAAATCCTGAAGCTGGTGGTGGATGCAGGTTTCATGGACGAATGCATCGACATTTACAGCAAATCGCGAAAAGGGTTTGTAGAACATTGTCAGCGGAAACTTTGGTTGCAAATTACAGCAGAAATAGATTATGTGAACATTATAAACTGGTTAGACACGTGCAAGGTAGCTGAGAAGATACTGTTTCCCATTGAAAGGAGACTCTGCGATTACCTCTTTTCAGGGTTCTCTGTCGCTGCGGATGTCTCCTTCGACAAGGTTTGCGAGGAACTGACGATTGGTCTACTGAGGTTGGCCAATACCACCATAGCAAACGGGAGCTATTTGTCAGATCTTTTGCTCGACTTCTTCCCTAAGATGTCGAAGTCATTGGGCGAGCTGGTCCTGAAGTTCACTTCAGAGACGTCGTTAGTGGATGATATTCATGACGTTCGACAAAGATTAGCTATGATAAACAACTTTATGCTTATTTACACTAATAATGTGCAGGCACCTTTTACCGACGGAGGGATTCATATATTTACTATGGAAGCAATGGACTACATCCATTCGATAACAAAGCAGAGAGCTGACCGATCTGATAGCGTCAGAAATTTTTTATTTTGGGTGATGATAGGAAGGATGATTGAGTTGTTAGAGAGCGAGTTGGTAGCCAAGTCCGAAAACTACTACCCAGACCCCGCATTGGGCCATGTTTTTTTGATCAATAATCTCAGCTACATAGAACAAAAGACGCGTGATTTGAAATTGAACAACGATTGGTTTCGACAAAACGCAGCAAAGGTGGAACAATACTGCAACGTGCAACGAAGAAGGATGTCACAACAAGCCAATGCTGATGTTGATAGTACTCTTGGTACCTCACCAGAAGATGGGGATTTTAGATTTCGAGGCCATTTACTCACTCAAAGTAGTTCACATTCACAAGATGATGTTCTTATCATCCAACAACTCATGAATTGTGTAAAGGAGCTTGAGAAAGAGAATCTGATGCTTGTTCGCATAGTTTGTAGTCACGTGGACAAATACCTTAAAACCGTGTTTGATTCCAAAGAAGTACCGGATCCCGATATTAACTTGGTGCTGGATTCACATCCACCGGAAAGTATGAGGCGCCTTAAGGAAAGCGTGAAGCTGATGGTGAATGCCGGTTTCATGGAGGAATGCAGCGACATTTACGGCAAATGGCGAAGGGAGTTTCTAGAACAGTGTCTGCTGGCACTTGGGTTGCAATTTCAAACGCCCAACAATAAGGACGTTGAGAAGTGGTTAACAACGTGCATGGCAGCTGTGAATATACTGTTTCCCAATGAAAAGAGACTCTGCAGTTACATCTTTTCAGGGATATATGACGCTGCGGTTGTCTCCTTCTTCGATAAGGTATTGTTTCCTAAGGAAAATAGACTCTGCTCTTACCTCTTTTCAGATTTCTTTGTCACTGTATATGTCTACTTCGAGAAGGTTTGCATGGAACTGACGATTAGTCTACTGAGTTTTGCCGATACCACCATAACAACGGGCAGCTATTCCCGGAATCTTTTGTTCAACATCGTCCCCAAAATGTCGGAGTCATTGGACGAACTGCTACTGGAGTTCACCTCACATATCTTTTTCCACAAACCGTCATTCTTACGTGATCTTGAAGACATTAAACAAATACTGGATATGCTAAACAGGTTTAGGGATATTATTTACCCTGATAATGCGTCGGCACCTGTTACCGACGGTGGGCTTCATCTGATTATTGCGGAAGCAATGAACTACATCCATACAATTTGTAAAGGTAAGATAAGACAGAGGGCTGACCAAACTTTCGGAAATTCTTCATTTTGGGTGGTGATAGGAAGGATGATTGAATTGTTAGAGAGCGAGTTGGAAGCCAAGTCTAAAGACTACTACGCTGACACCGCATTGGGCTATGTTTTTATGATGAATACTCTCAATTACATAGAACAAAAGATGCATGATTTGAAATTGGACGATGATTGGTTTCGACAAAACACAGCAAAGGTGGAATAA 2895 0.4235 MAETLLSYLRKNPMAMLSKILRWLKKPKVWRIVSLASSVVGLLCYALSSSFKHLLGNWSWWKMLLYIVFSFIICLAVLFTPARSSSISFRLESHLAFLVLITTSVCSFLFDKMVKGKPDAYSVISWAAFATMSPGLSNLTQFGFQIDLLYFFCGGLTVQLMKIKLWLVTVGGGFSYFLLQLRHHPSDTDGENLRLQDQNQVIIQVNDSGIALLTQSNSPSQDGSVDDGFIIGQQLINCIEELEKENEMLVPMFCRHIEKYLTKVLIDPEGVPNPDVNLVMDALPSETMRRLKEILKLVVDAGFMDECIDIYSKSRKGFVEHCQRKLWLQITAEIDYVNIINWLDTCKVAEKILFPIERRLCDYLFSGFSVAADVSFDKVCEELTIGLLRLANTTIANGSYLSDLLLDFFPKMSKSLGELVLKFTSETSLVDDIHDVRQRLAMINNFMLIYTNNVQAPFTDGGIHIFTMEAMDYIHSITKQRADRSDSVRNFLFWVMIGRMIELLESELVAKSENYYPDPALGHVFLINNLSYIEQKTRDLKLNNDWFRQNAAKVEQYCNVQRRRMSQQANADVDSTLGTSPEDGDFRFRGHLLTQSSSHSQDDVLIIQQLMNCVKELEKENLMLVRIVCSHVDKYLKTVFDSKEVPDPDINLVLDSHPPESMRRLKESVKLMVNAGFMEECSDIYGKWRREFLEQCLLALGLQFQTPNNKDVEKWLTTCMAAVNILFPNEKRLCSYIFSGIYDAAVVSFFDKVLFPKENRLCSYLFSDFFVTVYVYFEKVCMELTISLLSFADTTITTGSYSRNLLFNIVPKMSESLDELLLEFTSHIFFHKPSFLRDLEDIKQILDMLNRFRDIIYPDNASAPVTDGGLHLIIAEAMNYIHTICKGKIRQRADQTFGNSSFWVVIGRMIELLESELEAKSKDYYADTALGYVFMMNTLNYIEQKMHDLKLDDDWFRQNTAKVE 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01870 964 PANTHER EXOCYST COMPLEX PROTEIN EXO70 609 963 IPR004140 GO:0000145|GO:0006887
Viun8g01870 964 Pfam Exo70 exocyst complex subunit 714 963 IPR046364 GO:0000145|GO:0005546|GO:0006887
Viun8g01870 964 Pfam Exo70 exocyst complex subunit 341 559 IPR046364 GO:0000145|GO:0005546|GO:0006887
Viun8g01870 964 SUPERFAMILY Cullin repeat-like 624 958 IPR016159 -
Viun8g01870 964 Gene3D Exocyst complex component Exo70 215 585 - -
Viun8g01870 964 Gene3D Exocyst complex component Exo70 749 964 - -
Viun8g01870 964 Gene3D Exocyst complex component Exo70 592 748 - -
Viun8g01870 964 SUPERFAMILY Cullin repeat-like 255 558 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01870 Viun-Chr8 29503088 29506919 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01870 646 964 EXO70 exocyst subunit family AT5G58430 34.513 5.06e-33 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01870 - - vun:114195564 1926.75