Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01866 ATGGTCATGCTCAGCCAAATTCTGAGATGGCTGAACAAACCAAAGGTACTGAGACTTGTATGTCTTGCTTCATCCGTTGTTGGACTGCTCTGTTATGCACTCAGTTCCTCTTTCAACCATTTACTGGGAAACTACTGGAGCTGGTGGAAGATGCTTCTTTATGTTGTTTTCAGTTTCATCATTTGTTTAGCTGTATTATTCGCACCGGCAAGGTCGAGCTCCACCTCTCTCCGGTTGGAAGCTCATTTGGCATTTTTGGTTCTAATAGTCACTTCTGTTTATTCCTTTTTGTTTGATAACATGGTGAAGGGTAAACCGGATGCATACAGCCTCATCTCTTGTGCTGCTTTTGCTATCATGTCGCTTGGATTGTCAAATCTTACTCAATTTGGTTTCCAGATCGACCTGCTATATTTCTTCTGTGGAGGTCTAACAGTACAACTGATGAAGATCAAATTGTGGTTAGTCATTGTTGGAGGGGGTTTCAGTTATTCCCTCCTCCAGCTTCGAGACTATCCGCGCGACGCACAAGGGGAGAATCTTCAGCTCGAGGTCCACAATCAAATAGCCATTCAAGTTGATGATTCAGGGAGATTTAGTAATACCAGTCATGATATGATGTCACAACAAGCTAATGCTGATGTTGATAGTACTGTAGACACCCCACCACAAGATGAAGATCTTAGATTCCAAGACCATATACTCACTCAAAGCAATTCAGCTTCACAAGATGGAAGCGTTGGCTATGGTCTTATCATCGAACAACAACTAATGAATTTTATAAAAGATCTCGAGAAGGAGAATCAGATGCTTGTTCCCATGGTCTGTAGTTACGTGGAAAAATACCTTAAAGCCGTGTGTGACTCCAAAGAAGTACCGGACCCTGACATCAACTTGGTGATGGATGCCCTTCCATCGGAAATTATGAGGCGCCTTAAGAAAACCCTCAAGGTGATGATGGATGTAGGTTTTAAGGAGGAATTGAGCGACGTTTACAGCAAATGGCGAAGGGATTTTCTAGAACAATGTCTGCGGGCACTTGGGTTGCAATTTGAAACGCCCAACAATGAGGACTTTGAGAAGTGGTTAAAAACGTGCAAGGCAGCTGGGAAGATACTTTTTCCCAATGAAAGGAGACTCTGCGATTACCTCTTTTCAGGGATACATGTCGCTGCCGATGTTTCCTTCGAGAAGGTTTTCAAGGAACTGATGATTGGTCTTGTGAGTTTTGTCGATACCACCATAACAACTGGCAGTTATTCGCCGAATCTTCTGTCCAACATCGTCCCTAAAATGTCGAAGTCATTGGGCGAGCTGATACGGGAGTTCACCTCACAGTTGTTGTATCACAAATTGTCGTTCATACCTTATCTTGACGACGTTCAGCAAAGATTGGCTATGGTAAACAGCTTCAGGGATATTATTTACCCTGATAATGTGCCGGCACCTGTTACCGACGGAGGGCTTCATCTAATTACTAAGGAAGTAATGAACTACATCCTTGGAATTTGTACAAGTACGAATGAGCTGGCTGGGCGATCTCATCGCATCAGAAATTCTTCATTTTTGGTGGTGATAGGAAGGATGATGGAGTTGTTAGTGAGCGAGTTGGAAGCCAAGTCTAAAGACTACTACACTGACCCCGCATTGGGCTATGTTTTTATGATCAATAATCTCAACTACATAGCACAAAAGATGCATGATTTGAAATTCTACGATCATTGGTTTCGAGAAAAGGTGGGAGAAAACTGCATCCTCTATCTAAGAAGGTCATGGAATAAGACGTTGGACTTTTTGAAACTTGAGACAAATGAGTCACTGGAACCTGATGTGGTAGCGAAGTTAATGAAAGATAAGCTCTATCTGTTCAACCTGCACTTTGAGGAGACATGCACAATTCAATCTACATGGACTATCTCTGATAAACGACTGAGGAAACTAATAATAAAATCCATAGAAGCTTTTTTATTGCCAGAATATGGAAAATTTTCTGACAGATTTCGATTTGTTTTTGGTAATCAAGCTTATCATTATATTAAGTTTGGAATCGTAGATATTCAAAGTTGTCTTAGCCATTTGTTTCTCTTAGATGAGATGACTCTAAAAGACGCGAAAAGTGTACTTGCAAGAATTTAG 2136 0.4139 MVMLSQILRWLNKPKVLRLVCLASSVVGLLCYALSSSFNHLLGNYWSWWKMLLYVVFSFIICLAVLFAPARSSSTSLRLEAHLAFLVLIVTSVYSFLFDNMVKGKPDAYSLISCAAFAIMSLGLSNLTQFGFQIDLLYFFCGGLTVQLMKIKLWLVIVGGGFSYSLLQLRDYPRDAQGENLQLEVHNQIAIQVDDSGRFSNTSHDMMSQQANADVDSTVDTPPQDEDLRFQDHILTQSNSASQDGSVGYGLIIEQQLMNFIKDLEKENQMLVPMVCSYVEKYLKAVCDSKEVPDPDINLVMDALPSEIMRRLKKTLKVMMDVGFKEELSDVYSKWRRDFLEQCLRALGLQFETPNNEDFEKWLKTCKAAGKILFPNERRLCDYLFSGIHVAADVSFEKVFKELMIGLVSFVDTTITTGSYSPNLLSNIVPKMSKSLGELIREFTSQLLYHKLSFIPYLDDVQQRLAMVNSFRDIIYPDNVPAPVTDGGLHLITKEVMNYILGICTSTNELAGRSHRIRNSSFLVVIGRMMELLVSELEAKSKDYYTDPALGYVFMINNLNYIAQKMHDLKFYDHWFREKVGENCILYLRRSWNKTLDFLKLETNESLEPDVVAKLMKDKLYLFNLHFEETCTIQSTWTISDKRLRKLIIKSIEAFLLPEYGKFSDRFRFVFGNQAYHYIKFGIVDIQSCLSHLFLLDEMTLKDAKSVLARI 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01866 711 PANTHER EXOCYST COMPLEX PROTEIN EXO70 256 694 IPR004140 GO:0000145|GO:0006887
Viun8g01866 711 Pfam Exo70 exocyst complex subunit 361 691 IPR046364 GO:0000145|GO:0005546|GO:0006887
Viun8g01866 711 SUPERFAMILY Cullin repeat-like 269 694 IPR016159 -
Viun8g01866 711 Gene3D Exocyst complex component Exo70 249 700 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01866 Viun-Chr8 29495742 29497926 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01866 293 694 EXO70 exocyst subunit family AT5G58430 36.782 6.62e-66 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01866 - - vra:106752607 887.486