Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01865 ATGCAAACCTTGCTCTCTTACTTGAGAAAGAATCCCACGGCTATGCTCAGTAAAATTCTGAGATGGCTGAAGAAACTAAAGGGTAAACCAGATGCATACAGCCTCATCTCTTGGGCTGCTTTTGCAACCATGTCCCTTGGCTTGTCAAATCTCACTCAATTTGGATTCCAGATCGATCTGCTATATTTCTTCTGTGGAGGTCTAACCGTACAACTCATGAAGATGAAATTGTGGTTAGTCACTGTTGGAGGGTGTTTCAGTTATTCCCTCCTCCAGCTTCGTCACTATCCGAGCCACACAGACCGGGAGAATCTTCGGTTCCAGGACCAAAATCAAGTAATCATTCAAGTTAATGATTCAGGGATTGTTAGTAGTAGCAGTCATGAAGAAGCTAATGCTGTTGATAGTACTTTGGGCACCTCACTAGAAGATGAGGATCTTAGATTCCAAGACCATCTACTCACTCAAAGCAATTCTCCTTCACAAGATGGAAGCGTTGATGATGGTCTTATCATCGAACAACAACTCATAAATTGTATAAAGGAGCTTGAGAAGGAGAATGAGATGCTTGTGCCCATGGTTAGTAGTCACGTGGACAAATACCTTAAAGCCGTGTTTGACTCCAAAGAAGTAGCGGATGATCCGGACATCAACTTGGTGATGAATTCACTTCCATCAGAAATTATGAGGCGCCTTAAGGAAACCGTGAAGCTGATGATGAATGTCAGTTTCATGGAGGAATGCAACGACATTTACAGCAAATGGCGTAGGGAGTTTCTAGATGAGTGTCTGCGGGCACTTGGATTGCAATTTCAAACGCCCAACAATGAGGGCGTTGAGAATTGGTTAAAAACGTGCAAGGCAGCTGCGAAGATTTTGTTTCCCAATGAAAGGAGTATCTGCGATTACTTCTTTTCAGAGTTCTCTGTCATTGCGGATGTGTCCTTCCAAAAGGTTTGTAAGGAACTGACGACTGGTCTACTGAGTTTTGCCGATACCACCATAACAACTGAGAGCCATTTGCCGAATCTTTTGTCCAACATCGTCCCTAAAATGTTGGAGTCATTGGACGAGCTGATAGGGGAAATCTCAACGATGATGTTGTTTCCCAAATTCTTGTGCGTACCTGATCTTGAAGACTTTCGGAAAAAGTTGTATATTTTATGCAGTTTGAGGAATATTATTTACACTAATGATGTGGAGGCACCTGTTACCGACGGAGGGCTTCATCTGATTACTAAGAGAGCAATGAACTACATCCTTGATAATTCTGACAACATCGGAAATTCTTCATTTTGGGTGGTGATAGGAAGGATGATTGAGTTGTTGGGTAGCGAGTTGGAAGTGAAGTCTAAAGACTACTACACTGACCCCGCATTAGGCTATATTTTTATGATCAATAACCTCAGCTACATAGAACAAAAGACGCGTGATTTAAAATTGGACGATGATTGGTTTCGACAAAACACAGCAAAAGTGGAACAAAAGTGCAACCTGTATCTAAGAAGTTCGTGGAGTAAGATGGTGGAATTTTTGAAGGTTGAGACAAATGAGTCGGCGGAAGCTGATGTAGCAGGGGAGTTAATGAAAGAAAAGCTTCATTTGTTCAATCTGCACTTTGAGGAGACATGCACAATGCAATCTACGTGGACTGTCTGTGATAAACAACTGAGGGAACGAATAGTAAAATTCATAGAAGAGTTCTTGTTGCCTGAATATGGAAAATTTTCTGACAGGTTTCATGTTGTTTTTGGTAATCAAGCTTACGAGTATATTAAGTTTGGATTTCTGGACATTCAAAATTGTCTCAGCCATTTGTTTCTTCTAGACGAGGAGATGAATGTGGAATACAAGAAGAATGTATGA 1866 0.4126 MQTLLSYLRKNPTAMLSKILRWLKKLKGKPDAYSLISWAAFATMSLGLSNLTQFGFQIDLLYFFCGGLTVQLMKMKLWLVTVGGCFSYSLLQLRHYPSHTDRENLRFQDQNQVIIQVNDSGIVSSSSHEEANAVDSTLGTSLEDEDLRFQDHLLTQSNSPSQDGSVDDGLIIEQQLINCIKELEKENEMLVPMVSSHVDKYLKAVFDSKEVADDPDINLVMNSLPSEIMRRLKETVKLMMNVSFMEECNDIYSKWRREFLDECLRALGLQFQTPNNEGVENWLKTCKAAAKILFPNERSICDYFFSEFSVIADVSFQKVCKELTTGLLSFADTTITTESHLPNLLSNIVPKMLESLDELIGEISTMMLFPKFLCVPDLEDFRKKLYILCSLRNIIYTNDVEAPVTDGGLHLITKRAMNYILDNSDNIGNSSFWVVIGRMIELLGSELEVKSKDYYTDPALGYIFMINNLSYIEQKTRDLKLDDDWFRQNTAKVEQKCNLYLRSSWSKMVEFLKVETNESAEADVAGELMKEKLHLFNLHFEETCTMQSTWTVCDKQLRERIVKFIEEFLLPEYGKFSDRFHVVFGNQAYEYIKFGFLDIQNCLSHLFLLDEEMNVEYKKNV 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01865 621 PANTHER EXOCYST COMPLEX PROTEIN EXO70 162 607 IPR004140 GO:0000145|GO:0006887
Viun8g01865 621 SUPERFAMILY Cullin repeat-like 197 607 IPR016159 -
Viun8g01865 621 Gene3D Exocyst complex component Exo70 154 614 - -
Viun8g01865 621 Pfam Exo70 exocyst complex subunit 424 604 IPR046364 GO:0000145|GO:0005546|GO:0006887
Viun8g01865 621 Pfam Exo70 exocyst complex subunit 280 420 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01865 Viun-Chr8 29479242 29482011 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01865 216 607 EXO70 exocyst subunit family AT5G58430 36.659 3.30e-68 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01865 - - vra:106752607 801.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g01865 8 29479242 29482011 Viun8g01865 8 29479242 29482011 ECH