Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01864 ATGCAAACCTTGCTCTCTTACTTGAGAAAGAATCCCACGGCTATGCTCAGTAAAATTCTGAGATGGCTGAAGAAACTAAAGGTATGGAGAATTGTATCTCTTGCTTCATCTATTGTTGGACTGCTCTGTTATGCTCTCAGTTCCTCTTTCAAATATTTGCTGGGAAACTGGAGCTGGTGGAAGATGCTTCTTTATATTGTTTTCAGTTTCATCATTTGTTTAGCCGTCTTGTTCACACCCGCAAGGTCAAGTTCCATCTCTTTCCGGCTGGAATCTCATTTGGCATTTCTGGTTCTTATAATAACGTCTGTTTGTTCCTTTTTGTTTGATAACATGGTGAAGGGTAAACCAGATGCATACAGCCTCATCTCTTGGGCTGCTTTTGCAACCATGTCCCTTGGCTTGTCAAATCTCACTCAATTTGGATTCCAGATCGATCTGCTATATTTCTTCTGTGGAGGTCTAACCGTACAACTCATGAAGATGAAATTGTGGTTAGTCACTGTTGGAGGGTGTTTCAGTTATTCCCTCCTCCAGCTTCGTCACTATCCGAGCCACACAGACCGGGAGAATCTTCGGTTCCAGGACCAAAATCAAGTAATCATTCAAGTTAATGATTCAGGGATTGTTAGTAGTAGCAGTCATGAAGAAGCTAATGCTGTTGATAGTACTTTGGGCACCTCACTAGAAGATGAGGATCTTAGATTCCAAGACCATCTACTCACTCAAAGCAATTCTCCTTCACAAGATGGAAGCGTTGATGATGGTCTTATCATCGAACAACAACTCATAAATTGTATAAAGGAGCTTGAGAAGGAGAATGAGATGCTTGTGCCCATGGTTAGTAGTCACGTGGACAAATACCTTAAAGCCGTGTTTGACTCCAAAGAAGTAGCGGATGATCCGGACATCAACTTGGTGATGAATTCACTTCCATCAGAAATTATGAGGCGCCTTAAGGAAACCGTGAAGCTGATGATGAATGTCAGTTTCATGGAGGAATGCAACGACATTTACAGCAAATGGCGTAGGGAGTTTCTAGATGAGTGTCTGCGGGCACTTGGATTGCAATTTCAAACGCCCAACAATGAGGGCGTTGAGAATTGGTTAAAAACGTGCAAGGCAGCTGCGAAGATTTTGTTTCCCAATGAAAGGAGTATCTGCGATTACTTCTTTTCAGAGTTCTCTGTCATTGCGGATGTGTCCTTCCAAAAGGTTTGTAAGGAACTGACGACTGGTCTACTGAGTTTTGCCGATACCACCATAACAACTGAGAGCCATTTGCCGAATCTTTTGTCCAACATCGTCCCTAAAATGTTGGAGTCATTGGACGAGCTGATAGGGGAAATCTCAACGATGATGTTGTTTCCCAAATTCTTGTGCGTACCTGATCTTGAAGACTTTCGGAAAAAGTTGTATATTTTATGCAGTTTGAGGAATATTATTTACACTAATGATGTGGAGGCACCTGTTACCGACGGAGGGCTTCATCTGATTACTAAGAGAGCAATGAACTACATCCTTGATAATTCTGACAACATCGGAAATTCTTCATTTTGGGTGGTGATAGGAAGGATGATTGAGTTGTTGGGTAGCGAGTTGGAAGTGAAGTCTAAAGACTACTACACTGACCCCGCATTAGGCTATATTTTTATGATCAATAACCTCAGCTACATAGAACAAAAGACGCGTGATTTAAAATTGGACGATGATTGGTTTCGACAAAACACAGCAAAAGTGGAACAAAAGTGCAACCTGTATCTAAGAAGTTCGTGGAGTAAGATGGTGGAATTTTTGAAGGTTGAGACAAATGAGTCGGCGGAAGCTGATGTAGCAGGGGAGTTAATGAAAGAAAAGCTTCATTTGTTCAATCTGCACTTTGAGGAGACATGCACAATGCAATCTACGTGGACTGTCTGTGATAAACAACTGAGGGAACGAATAGTAAAATTCATAGAAGAGTTCTTGTTGCCTGAATATGGAAAATTTTCTGACAGGTTTCATGTTGTTTTTGGTAATCAAGCTTACGAGTATATTAAGTTTGGATTTCTGGACATTCAAAATTGTCTCAGCCATTTGTTTCTTCTAGACGAGGAGATGAATGTGGAATACAAGAAGAATGTATGA 2127 0.4104 MQTLLSYLRKNPTAMLSKILRWLKKLKVWRIVSLASSIVGLLCYALSSSFKYLLGNWSWWKMLLYIVFSFIICLAVLFTPARSSSISFRLESHLAFLVLIITSVCSFLFDNMVKGKPDAYSLISWAAFATMSLGLSNLTQFGFQIDLLYFFCGGLTVQLMKMKLWLVTVGGCFSYSLLQLRHYPSHTDRENLRFQDQNQVIIQVNDSGIVSSSSHEEANAVDSTLGTSLEDEDLRFQDHLLTQSNSPSQDGSVDDGLIIEQQLINCIKELEKENEMLVPMVSSHVDKYLKAVFDSKEVADDPDINLVMNSLPSEIMRRLKETVKLMMNVSFMEECNDIYSKWRREFLDECLRALGLQFQTPNNEGVENWLKTCKAAAKILFPNERSICDYFFSEFSVIADVSFQKVCKELTTGLLSFADTTITTESHLPNLLSNIVPKMLESLDELIGEISTMMLFPKFLCVPDLEDFRKKLYILCSLRNIIYTNDVEAPVTDGGLHLITKRAMNYILDNSDNIGNSSFWVVIGRMIELLGSELEVKSKDYYTDPALGYIFMINNLSYIEQKTRDLKLDDDWFRQNTAKVEQKCNLYLRSSWSKMVEFLKVETNESAEADVAGELMKEKLHLFNLHFEETCTMQSTWTVCDKQLRERIVKFIEEFLLPEYGKFSDRFHVVFGNQAYEYIKFGFLDIQNCLSHLFLLDEEMNVEYKKNV 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01864 708 PANTHER EXOCYST COMPLEX PROTEIN EXO70 249 694 IPR004140 GO:0000145|GO:0006887
Viun8g01864 708 Gene3D Exocyst complex component Exo70 238 701 - -
Viun8g01864 708 SUPERFAMILY Cullin repeat-like 284 694 IPR016159 -
Viun8g01864 708 Pfam Exo70 exocyst complex subunit 511 691 IPR046364 GO:0000145|GO:0005546|GO:0006887
Viun8g01864 708 Pfam Exo70 exocyst complex subunit 367 507 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01864 Viun-Chr8 29479241 29482011 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01864 303 694 EXO70 exocyst subunit family AT5G58430 36.659 4.09e-67 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01864 - - vra:106752607 885.174