Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01863 ATGCAAACCTTTCTCTCTTACTTGAGAAAGAATGCAATGGCCATGCATAACCAAATTCTGAGATGGCTGAAGAAAACAAAGGTACTCAAACTTGTATCTCTTGCTTCATCTGCTGTTGGACTGCTCTGTTATGCTCTCAGTTCCTCTTTCAACCATTTCTTGGGAAACTGGAGCTGGTGGAAGATGCTTCTTTATATTGTTTTCAGTTTCATCATTTGTTTAGCCGTCTTGTTCACACCCGCAAGGTCAAGTTCCACATCTTTCCGGCTGGAATTTCATTTGGCATTTTTGGTTCTTATAATCACGTCTGTTTGTTCCTTCTTGTTTGATAACGTGGTGAAGGGTAAACCAGACGCATACAGCCTCATCTCTTGGGCTGCTTTTGCAACCATGTCGCTTGGCTTGTCAAATCTCACTCAATTTGGATTCCAGATCGATCTTCTATATTTCTTCTGCGGAGGTCTAACAGTACAACTCATGAAGATCAAATTGTGGTTAGTCACTATTGGAGGGGGTTTCAGTTATTCCCTCCTCCAGCTTCGTCACTATCCGAGCCACTCAGACAGGGAGAACCTTCGACTCGAGAACCAAAATCAAGTAATCATTCAAGTTAATGATTCAGGGATTGGTAGTAGTAGTACAAGTCATGAAGAAGCTAATGCTGATGTTGATAGTACTCCAGGCACCTCACCAGAAGATGAGAATCTTAGATTCCAAGACCATCTACTCACTCAAAGCAATTCACCTTCACAAGATGGAAGCGTTGACGATGGTCTTATCATCCGACAACAGCTCATAAATAGTATAAAAGAGCTTGAAAAGGAGAATGAGATGCTTGTTCCCATGTTTTGTAGACACATAGAGAAATACCTTACAAACGTGTTAGTTGACCCCGAAGGAGCACCCAATCCTGACGTCAACTTGGTGATGGATGCACTTCCATCGGAAATTATGAGGCGCCTTAAGGAAACCGTGAAGCTGATGGTAGATGCAGGTTTTCAGGAGGAATGCAGCGACATTTACAGCAAATGGCGAAGGGAATTTCTACAACATTGTCTGCAGAAACTTGGGTTGCAAATTGAATTGCAATTGGAAGAGCCCAACAATGAGAACATTATGAAGTGGTTAGACACGTGTATGGTAGCTGAGAAGATACTGTTTCCCAATGAAAGGAAACTCTGCGATTACCTCTTTTCAGGGTTCTCTGTCGCTGCAGATGTCTCCTTCGATAAGGTTTGCGAGGAACTGACGATTGGTCTACTAAGTTTTGCCAATACCATCATAACAACTGGGAGCTATTTGTCGGATCTTTTGCTCGATTTCTTCCCTACAATGTCGAAGTCATTGGGCGAGCTGACCCTGAAGTTTACTTCAGAGACGTCATTTGTAGATGATATTGAAGACGTTCGGCAAAGGTTGGCTATGCTAAACAAGTTTGGGCTAATTATTTACACTAATAATGTGCAGGCACTTGTTACCGACGGAAGGCTTCATCTATTTATTATGGAAGCAATGCACTACATCCATTGGATAACAAAACAGAGGGTTGACCGATCCGACAACGTGGGAAATTTTTTATTTTGGGTGATGATAGTAAGGATGATTGAGTTGTTAGAGAGAGAGTTGGTAGCCAAGTCCGAAAACTACTACTCTGACCCCGCATTGGGCCATGATTTTATGATCAATAATCTCAGCAACATAGAACAAAAGACGCGTGATTTGAAATTGAGCAATGATTGGTTTCGACAAAACGCAGCAAAGGTGGAACAATACTGCAACGTGCATCTAAGAAGGTTGTCAGAACAAGCTAATGCTGATATTATTACTCTTGGTACCTCACCAGAATATGGGGACCTTAGATTTCGAGGCCATCTAATCACTCAAAGCACTTCATATTCACAAGATGATGTTCTTATCATCCAGCAACTCGTGAATTGTGTAAAGGAGCTTGAGAAAGAGAATCAGATCCTTGTTTCCATGGTTTGTAGTCACGTGGGCAAATACCTTAAAGCCGTGTTTGATTCCAAAGAAGTACCGGATCCCGACATCAACTTCGTGATGGATTTACTTCAACCCAAAATTATGAGGCGCCTTAAGGAAACCGTGAAGCTGATGGTGGATGCCGGTTTCATGTTGGAATGCAGCGACATTTACAGCAAATGGCGTAGGAAGTTTCTAGAACAGTGTCTGCGAGCACTTGGGTTGCAATTTCAAACGCCTAACAATAAGGACGTTGAGAAGTGGTTAAAAACGTGCAAGGCAGCTGCAAAGGTACTGTTTCCCAACGAAAAGAGACTCTGCGATTACCTCTTTTCAGGGTTCTTTTTCACTTTGGATGTCTACTTCGAGAAGGTTTGCAAGGAACTGACGATTGGTCTACTGAGTTTTGTCGATACCACCATAACAACCGGCAACTATTCGCCGAATCTTTTGTTCAACATTGTCCCTAAAATGTCTGAGTCATTGGACGAACTGCTACTGGAGTTCACCTCACAGATCTTTTTTCACAAACCGTCATTCTTACGTGATCTTGAAGACATTAAACAAATACTGGATATGCTAAACAGGTTTAGGGATATTATTTACCCTGATAATGTGTCGGCACCTGTTACCGACAGTGGGCTTTGTCTGATTACTGAGGAAGCAATGAACTACATCCATATGATTTGTAAAGGTAAGAAAAGACAGAGGGCTGACCAAACTTACTACGTTGGAAATTCTTCATTTTGGGTGGTGATAGGAAGGATGATTGAATTGTTGGAGAGCGAGTTGGAAGCCAAGTCTAAAAACTACTACGCTGACCCCGCCTTGGGCTCTGTTTTTATGATTAATAATCTCAGCTACATAGCACAAAAGACGCATGATTTGAAATTGGACGATGATTGGTTTCGACAAAACACAACAAAAGTAGAACATAACTGCAACCTCTATCTAATAAGTTCGTGGAATAAGGTGGTGGAACTTTTGAAGGTTGAGACAAATGACTCCGCGGAAGCTGATGTGGTAGCGGAGTTAATGAAAAGGAAGCTGCATTTGTTCAACATGCACTTTGAGGAGACATGCACAATTCAATCTACATGGACTGTCTCTGATAAGCGACTGAAGGAACGAATGATAAAATCCATAGAGGATTTTTTGTTGCCAAAATATGGAAAATTTTGTGACGAGTTTCGAGTTGTTTTTGGTAATCAAGCTTATCATTATATTAAGTTTGGATTTCTAGACATTCAAAATTGTCTCAACCATTTGTTTCTTCTAGACGAGGAGATGAATACGGAAGACAAGAAAAACATATGA 3297 0.4134 MQTFLSYLRKNAMAMHNQILRWLKKTKVLKLVSLASSAVGLLCYALSSSFNHFLGNWSWWKMLLYIVFSFIICLAVLFTPARSSSTSFRLEFHLAFLVLIITSVCSFLFDNVVKGKPDAYSLISWAAFATMSLGLSNLTQFGFQIDLLYFFCGGLTVQLMKIKLWLVTIGGGFSYSLLQLRHYPSHSDRENLRLENQNQVIIQVNDSGIGSSSTSHEEANADVDSTPGTSPEDENLRFQDHLLTQSNSPSQDGSVDDGLIIRQQLINSIKELEKENEMLVPMFCRHIEKYLTNVLVDPEGAPNPDVNLVMDALPSEIMRRLKETVKLMVDAGFQEECSDIYSKWRREFLQHCLQKLGLQIELQLEEPNNENIMKWLDTCMVAEKILFPNERKLCDYLFSGFSVAADVSFDKVCEELTIGLLSFANTIITTGSYLSDLLLDFFPTMSKSLGELTLKFTSETSFVDDIEDVRQRLAMLNKFGLIIYTNNVQALVTDGRLHLFIMEAMHYIHWITKQRVDRSDNVGNFLFWVMIVRMIELLERELVAKSENYYSDPALGHDFMINNLSNIEQKTRDLKLSNDWFRQNAAKVEQYCNVHLRRLSEQANADIITLGTSPEYGDLRFRGHLITQSTSYSQDDVLIIQQLVNCVKELEKENQILVSMVCSHVGKYLKAVFDSKEVPDPDINFVMDLLQPKIMRRLKETVKLMVDAGFMLECSDIYSKWRRKFLEQCLRALGLQFQTPNNKDVEKWLKTCKAAAKVLFPNEKRLCDYLFSGFFFTLDVYFEKVCKELTIGLLSFVDTTITTGNYSPNLLFNIVPKMSESLDELLLEFTSQIFFHKPSFLRDLEDIKQILDMLNRFRDIIYPDNVSAPVTDSGLCLITEEAMNYIHMICKGKKRQRADQTYYVGNSSFWVVIGRMIELLESELEAKSKNYYADPALGSVFMINNLSYIAQKTHDLKLDDDWFRQNTTKVEHNCNLYLISSWNKVVELLKVETNDSAEADVVAELMKRKLHLFNMHFEETCTIQSTWTVSDKRLKERMIKSIEDFLLPKYGKFCDEFRVVFGNQAYHYIKFGFLDIQNCLNHLFLLDEEMNTEDKKNI 1098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01863 1098 MobiDBLite consensus disorder prediction 209 233 - -
Viun8g01863 1098 SUPERFAMILY Cullin repeat-like 285 592 IPR016159 -
Viun8g01863 1098 SUPERFAMILY Cullin repeat-like 652 1084 IPR016159 -
Viun8g01863 1098 Pfam Exo70 exocyst complex subunit 747 1081 IPR046364 GO:0000145|GO:0005546|GO:0006887
Viun8g01863 1098 Pfam Exo70 exocyst complex subunit 374 593 IPR046364 GO:0000145|GO:0005546|GO:0006887
Viun8g01863 1098 PANTHER EXOCYST COMPLEX PROTEIN EXO70 643 1084 IPR004140 GO:0000145|GO:0006887
Viun8g01863 1098 MobiDBLite consensus disorder prediction 209 234 - -
Viun8g01863 1098 Gene3D Exocyst complex component Exo70 628 1092 - -
Viun8g01863 1098 Gene3D Exocyst complex component Exo70 252 610 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01863 Viun-Chr8 29463696 29467355 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01863 298 591 EXO70 exocyst subunit family AT5G58430 35.802 2.88e-38 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01863 - - var:108336450 1608.19