Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01862 ATGGAGGTTCTCTGTTTGTGGTGGGTGAATGGTTGGATGCAAACCTTGCTCATACTCAAGCAAATTCTGAGATGGCTGAAGAAACCAAAGGTACTGAGACTTCTATGTCTTGCTTCATCTGTTGTTGGACTGCTCTGTTATGCACTCAGTTCCTCTTTCAACCGTTTACTGGGAAGCTGGAGCTGGTGGAAGATGCTTCTTTATATTATTTTCAGTTCAATCACTTGCCTTGCCGTCTTGTTCACACCGGCAAGGTCGAGTTCCTCCTCTCACCGGTTAGAAGTTCATTTGGCATTTTTGGTTCTAGTAACCACTTCTGTTTATTCCTTCTTCTTTGATAACGTAGTGAAGGGTAAACCAGATGCATACAGTCTGATCTCTTGTGCTGCTTTTGCTACCATGTCGCTTGGCTTGTCAAATCTTACTCAATTTGGATTCCAGATAGATCTGCTATATTTCTTTTGCGGAGTTCTAACAGTACAACTCATGAAGATCAAATTGTGGTTAGTCATTGTTGGAGGGGGTTTCAGTTATTCCCTCCTCCAGCTTCGAGACTATCCGCGCGACACCCCAGAGGAACAAAATCAAGTAATCATTCAAGTTGATGATTCAGGGAGTGTTAGTAATAGCAGTCATGATAGCACTCTAGGCACTTCACCAGAAGATGAGGATCTTAGATTCCAAGACCATCTACTCACTCAAAGCAATTCACCTTCACAAGAGGAAAGTGTTGATGATGTTCTTATCATCCAACAACAACTCATGAATTGTGTAAAGGAGCTTGAGAAGGAGAATGAGATGCTTGTTCCCATGCTTTGTAGTCACGTGGACAAATACTTTAAAGCCGTGTTTGACTCCAAAGAAGTACCGGATGATCCCGACATTAACTTGGTGATGGATTCACTTCCATCGGAAATTATGAGGCGCCTTAAGGAAACCATGAAGCTGATGGTGAATGCCGGTTTCATGGAGGAATGCAGCAACATTTACAGCAAATGGCGCAGGGAGTTTCTAGAACAGTGTCTGCGGGCACTTGGGTTGCAATTTGAAACGCCCAACAACGAGGACGTTGAGAAGTGGTTGAAAACGTGTAAGGCAGCTGCGAATATACTGTTTCCCAATGAAAAGAGACTCTGCAATTACCTCTTTTCAGAGATCCCTGTCGCTGCTGCGGATGTTTCCATTAATAAGGTTTGCAAGGAAGTGACTATTGGTCTAGTGAGTTTTGCCGATACCATCATGACAACTGGGAATTTGTCGAATCTTTTGTTCAACATCGTCCCTAAAATGTCGGAGTCATTTGTCGAGTTGTCACGGGAGTTCATCTCACTGGTTTTGTATCGCAAGTTCTCGTTTATAGATGACATTCAAGACGTTCGACAAAGATTGGCTATGCTAAAGAAGTTGAGGAAATTTATTTATCCCAATAAGGTGCAGGCACCTGTCACCGATGGAGGGCTTCATCTGATTACTAAGAAAGCAATGGACTACATCCATCTAATTTGTAAAGGTAAGATAAAGCAGAGGGATGACCAAACTTACCGCATGGGAAATTCTTCATTTTGGGTGGTGATAGGAAGGATGATTGAATTGTTAGAGAGCGAGTTGGAAGCCAAGTCTAAAGACTACTACGCTGACCCCGCCTTGGGCTCTGTTTTTATGATTAATAATCTCAGCTACATAGAACAGAAGACGCTTGATTTGAAATTTGACGATGATTGGTTTCGACAAAACAGAGCAAAGGTGGAACAAAAGTGCAACCTGTATATAAGAAGTTCGTGGAATAAGATGGTGGAGTTTTTGAAGGCCGAGACGTATGAGTCCGCGGAACCTGATGTGGTACCGGACGTAATGAAAGATAAACTCCATTTGTTCAACCTTCACTTTGAGGAGACATGCACAATTCAATCTACATGGACTGTCTCTAATAAGCGTCTGAAGGAACGAATAATAAAATCCATAGAGGAGTTTTTGTTGCCACAATATGGAAAATTTTGTGACAACTTTCGAGTAGCTTTTGGTAATCAAGCTTATCATTATATTAAGTTTGGATTTCTAGACATTCAAAATTGTCTCAGCCATTTGTTTCTTCTAGACGAGGAGATGAATACGGAAGACAAGAAAAACATATGA 2133 0.4173 MEVLCLWWVNGWMQTLLILKQILRWLKKPKVLRLLCLASSVVGLLCYALSSSFNRLLGSWSWWKMLLYIIFSSITCLAVLFTPARSSSSSHRLEVHLAFLVLVTTSVYSFFFDNVVKGKPDAYSLISCAAFATMSLGLSNLTQFGFQIDLLYFFCGVLTVQLMKIKLWLVIVGGGFSYSLLQLRDYPRDTPEEQNQVIIQVDDSGSVSNSSHDSTLGTSPEDEDLRFQDHLLTQSNSPSQEESVDDVLIIQQQLMNCVKELEKENEMLVPMLCSHVDKYFKAVFDSKEVPDDPDINLVMDSLPSEIMRRLKETMKLMVNAGFMEECSNIYSKWRREFLEQCLRALGLQFETPNNEDVEKWLKTCKAAANILFPNEKRLCNYLFSEIPVAAADVSINKVCKEVTIGLVSFADTIMTTGNLSNLLFNIVPKMSESFVELSREFISLVLYRKFSFIDDIQDVRQRLAMLKKLRKFIYPNKVQAPVTDGGLHLITKKAMDYIHLICKGKIKQRDDQTYRMGNSSFWVVIGRMIELLESELEAKSKDYYADPALGSVFMINNLSYIEQKTLDLKFDDDWFRQNRAKVEQKCNLYIRSSWNKMVEFLKAETYESAEPDVVPDVMKDKLHLFNLHFEETCTIQSTWTVSNKRLKERIIKSIEEFLLPQYGKFCDNFRVAFGNQAYHYIKFGFLDIQNCLSHLFLLDEEMNTEDKKNI 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01862 710 SUPERFAMILY Cullin repeat-like 255 696 IPR016159 -
Viun8g01862 710 PANTHER EXOCYST COMPLEX PROTEIN EXO70 248 696 IPR004140 GO:0000145|GO:0006887
Viun8g01862 710 Gene3D Exocyst complex component Exo70 234 704 - -
Viun8g01862 710 Pfam Exo70 exocyst complex subunit 359 693 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01862 Viun-Chr8 29458070 29460202 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01862 294 696 EXO70 exocyst subunit family AT5G58430 36.490 3.71e-65 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01862 - - vra:106752607 940.258