Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01860 ATGTCGCTTGGCTTGTCAAATCTTACTCAATTTGGATTCCAGATAGATCTGCTATATTTCTTTTGCGGAGTTCTAACAGTACAACTGATGAAGATCAAATTGTGGTTAGTCATTGTTGGAGGGGGTTTCAGTTATTCCCTCCTCCAGCTTCGAGACTATCCGCGCGACACCCCAGAGGAACAAAATCAAGTAATCATTCAAGTTGATGACACAGAGAGTCATGTTATCATCATGTCACAACAAGCTAATTCTGATGTTGATGATATATCTACCTCACCAGAAGATAGGGATCTTATCATCCAACAACAACTCACGAATTATCCCGTAGACACATACCTTACAAAGGTGTTAGTTGACCCCGAAGGAGTACCGAATCCTCGCGTCGATTTGTTGATGCATGCACTTCCATCGGAAATTATGAGGCGCCTTAAGGAAACCGCGAAGCTGATGGTGAATGGCGGTTTCATGGAGGAATGCAGCGACATTTACAGCAAATGGCGTAGGGAGTTTCTAAAACAGTGTCTGCGGGAACTTCGGTTGCAACTTTATATGTACAACAACGAGGACGTTGAGAAGTGGTTAAAAACGTGCAAGGCTGCTGGGAAGATACTGTTTCCCAATGAAAGGAGCCTCTGCGATTACCTCTTTTCAGGGAGCCATGTCGCTGCCAATGTCTACTTCGAGAAGATTTGCAAGGAACTGACGATTAGTTTAGTGAGTTTTGCAAATACCACCATAACAACCCGGAGCTATTTGCCGAATCTTTTGTGCAACATCGTCCCTAAAATGTCGCAGTCATTGGGCGAGCTGCTACCGGAATTCACCTCACCGATCTTGTTTATCAAATCATCGTTCTTAAGGGATCTTCAAGACATTCAGGAAATATTGGCTACGCTAAACAACTTTGGGGATATCATTTACCCTGATAATGTGTCGGCACCTTTTACCAACGGAGGGCTTCATCTGATCACTAAGGAAGCAACGGATTACATCATTAGAAGTTGTGTAGCTTGGATACACCGGAGGTCTGGCCAATCTAACCGCGTCGAGAATTCTTCGTTTTGGATGGTGATAGGAAGGATGATGGAGTTGTTAGAGAGCGAGTTGGAAGCCAAGTCTAAAGACTACTACACTGACCCCGCATTGGGCTATATTTTTATGATCAATAATCTCAGTTACATAGAACAAAAGAGGAGTCATTTGAAATTCGACAATGATTGGTTTCCAAGAAACACAACAAAGGTGCAGCAAAAATGCAACTTGTATCTAAGAAGGTCGTGGAATAAGATTGTGGAGTTTTTAAAGATTGAGACAAATGAGTCTGTGGAAGCTGTTGTGGTAGCGGAGTTAATGAAAGATAAGCTACATTTGTTCAACCTGCACTTTGAGGAGACATGCACAATTCAATCTACATGGACGGTTTCTAATAAGGGACTGAAGGAACGAATAATAAAATCCATAGAAGAGATTTTGTTGCCACGATATGGAAAGTTTTGTGATAGGTTTCAAGTTGTTTCTGGTAATCAAGCTTATGAGTATATTAAGTTCGGAATCGTAGACATTCAAAATTGTCTCAGCAATTTGTTTCAAGGAAATATGATATCACTTTGTTAG 1614 0.4151 MSLGLSNLTQFGFQIDLLYFFCGVLTVQLMKIKLWLVIVGGGFSYSLLQLRDYPRDTPEEQNQVIIQVDDTESHVIIMSQQANSDVDDISTSPEDRDLIIQQQLTNYPVDTYLTKVLVDPEGVPNPRVDLLMHALPSEIMRRLKETAKLMVNGGFMEECSDIYSKWRREFLKQCLRELRLQLYMYNNEDVEKWLKTCKAAGKILFPNERSLCDYLFSGSHVAANVYFEKICKELTISLVSFANTTITTRSYLPNLLCNIVPKMSQSLGELLPEFTSPILFIKSSFLRDLQDIQEILATLNNFGDIIYPDNVSAPFTNGGLHLITKEATDYIIRSCVAWIHRRSGQSNRVENSSFWMVIGRMMELLESELEAKSKDYYTDPALGYIFMINNLSYIEQKRSHLKFDNDWFPRNTTKVQQKCNLYLRRSWNKIVEFLKIETNESVEAVVVAELMKDKLHLFNLHFEETCTIQSTWTVSNKGLKERIIKSIEEILLPRYGKFCDRFQVVSGNQAYEYIKFGIVDIQNCLSNLFQGNMISLC 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01860 537 PANTHER EXOCYST COMPLEX PROTEIN EXO70 131 531 IPR004140 GO:0000145|GO:0006887
Viun8g01860 537 Pfam Exo70 exocyst complex subunit 192 526 IPR046364 GO:0000145|GO:0005546|GO:0006887
Viun8g01860 537 SUPERFAMILY Cullin repeat-like 128 529 IPR016159 -
Viun8g01860 537 Gene3D Exocyst complex component Exo70 90 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01860 Viun-Chr8 29449182 29450847 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01860 120 531 EXO70 exocyst subunit family AT5G58430 35.440 1.61e-68 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01860 - - vun:114195074 1074.31