Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01857 ATGGGATGCACTTCACTACTCAGAAGTCCCAAGAAAGAAGAACAAGAGGTACCAGAAGCCATCACCTCCGTTTTACCAAATTCTGACCAATCTTACAGCTATGAAGATTTCAATATTTTGGAGGAACTGGAAGGGGTCTTCAACTCCAAAGAGGAACAAAAGTTGCTGCAACAAGACTCTTCAAGTGGCGAACTCCATTGGGATTTCATGGAATGGGAGGAATTTGCTCCCATTGAAGAGGAAGGAGAAGACGAAAACGAAGGAAAAGAACAGGTAACAGAGAGCACGAACCGGTACCCTTTTGAGGAGCAGCAGATAAAGAGAGAAAACATTGTTGGGTTTTGGGAAATGGATGATGAAAAGATGGTGGCTTTGAACTTGAACTTGAACTATCAAGAGGTTTTGGATGCATGGTCTAACCGAGGCTCTCTATGGGCTGATGACTGTTCTCTTTCCTTGGCAACCAACAATGGCTACTATAATGGAGAAGTGCCGGTGTTGGAAGAAGAGAGAGCGAGAAGAGAAGCAAGTGTTCTTAGATACAAAGAGAAACGTCAGAACAGATTGTTCGCAAAGAAGATAAGATACCAAGTTCGGAAACTAAACGCTGATAAAAGACCAAGAATCAAGGGTCGCTTTGTGAAGAGACACTGA 654 0.4312 MGCTSLLRSPKKEEQEVPEAITSVLPNSDQSYSYEDFNILEELEGVFNSKEEQKLLQQDSSSGELHWDFMEWEEFAPIEEEGEDENEGKEQVTESTNRYPFEEQQIKRENIVGFWEMDDEKMVALNLNLNYQEVLDAWSNRGSLWADDCSLSLATNNGYYNGEVPVLEEERARREASVLRYKEKRQNRLFAKKIRYQVRKLNADKRPRIKGRFVKRH 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01857 217 MobiDBLite consensus disorder prediction 1 29 - -
Viun8g01857 217 Pfam CCT motif 174 216 IPR010402 GO:0005515
Viun8g01857 217 ProSiteProfiles CCT domain profile. 174 216 IPR010402 GO:0005515
Viun8g01857 217 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 13 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01857 Viun-Chr8 29414742 29416005 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01857 118 216 C2C2-CO-like Transcription Factor Family AT1G73870 47.059 2.08e-21 89.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Viun8g01857 CCT 2.5e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01857 - - aprc:113847792 339.732