Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01856 ATGGGATGCACTTCACTACTCAGAAGTCCCAAGAAAGAAGAACAAGAGGTACCAGAAGCCATCACCTCCGTTTTACCAAATTCTGACCAATCTTACAGCTATGAAGATTTCAATATTTTGGAGGAACTGGAAGGGGTCTTCAACTCCAAAGAGGAACAAAAGTTGCTGCAACAAGACTCTTCAAGTGGCGAACTCCATTGGGATTTCATGGAATGGGAGGAATTTGCTCCCATTGAAGAGGAAGGAGAAGACGAAAACGAAGGAAAAGAACAGGTAACAGAGAGCACGAACCGGTACCCTTTTGAGGAGCAGCAGATAAAGAGAGAAAACATTGTTGGGTTTTGGGAAATGGATGATGAAAAGATGGTGGCTTTGAACTTGAACTTGAACTATCAAGAGGTTTTGGATGCATGGTCTAACCGAGGCTCTCTATGGGCTGATGACTGTTCTCTTTCCTTGGCAACCAACAATGGCTACTATAATGGAGAAGTGCCGGTGTTGGAAGAAGAGAGAGCGAGAAGAGAAGCAAGTGTTCTTAGATACAAAGAGAAACGTCAGAACAGATTGTTCGCAAAGAAGATAAGATACCAAGTTCGGAAACTAAACGCTGATAAAAGACCAAGAATCAAGGTTTCACTTTTGAATTTTTTGTGTTTCTTTTTGGTGGCATTGGGTTTTGCAGTATGGTCATTTTGTTTGTTTTGTTATGAAAGCAGCTTTTTCCGATATTTTTGTTGTAGGGTCGCTTTGTGA 753 0.4143 MGCTSLLRSPKKEEQEVPEAITSVLPNSDQSYSYEDFNILEELEGVFNSKEEQKLLQQDSSSGELHWDFMEWEEFAPIEEEGEDENEGKEQVTESTNRYPFEEQQIKRENIVGFWEMDDEKMVALNLNLNYQEVLDAWSNRGSLWADDCSLSLATNNGYYNGEVPVLEEERARREASVLRYKEKRQNRLFAKKIRYQVRKLNADKRPRIKVSLLNFLCFFLVALGFAVWSFCLFCYESSFFRYFCCRVAL 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01856 250 MobiDBLite consensus disorder prediction 1 29 - -
Viun8g01856 250 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 13 210 - -
Viun8g01856 250 Pfam CCT motif 174 210 IPR010402 GO:0005515
Viun8g01856 250 ProSiteProfiles CCT domain profile. 174 216 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01856 Viun-Chr8 29414742 29416005 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01856 118 210 C2C2-CO-like Transcription Factor Family AT1G73870 44.248 1.13e-16 76.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Viun8g01856 CCT 4.9e-15 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01856 - - aprc:113847792 358.992