Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01852 ATGGAGAAGGTGGTGTGTGTCACCGGCGGCAGCGGCGCCATCGGTTCATGGCTCGTCCACCTCCTTTTGGACCGCGGCTACACCGTCCACGCCACCGTTCAAATTCTCAACGATGAGGCCGAGACGAAGCATCTAGAAGCCTTGGATGGAGCACCGGCACGCCTCCGCCTCTTCCAGATGGATCTCCTCGACTACGATTCCGTCCTCGCCACCGTGTGCGGCTGCGCCGGCGTGTTCCACGTGGCCTCTCCCTGCACTATTGAACAAGTCCAGGACCCTCAGAAGGAGCTTCTGGACCCGGCGATAAAGGGCACCTTGAACGTGCTAACGGCGGCGAAAGAAGCAGGGGTGCGTCGCGTGGTGGTCACGTCCTCCATCTCCGCCATTGTTCCGAGCCCCAATTGGCCTGGTGACGTTCCCAAGAGGGAGAACTGCTGGACTGATATTGAATTTTGCAAGCAAAAGGGGACTTTGGCCGAGAAAGCAGCTTGGGATTTTGCAAAGGAGACTGGGTTAGATGTTGTTGTGGTGAATCCTGGCACTGTTGTGGGTCCTGTTATTGCACCGAGGCTTAATGCAAGCATGGTCATGTTTGTTCGCCTACTACAAGGTTGTGATGATACATATGAGAATTTTTTTATGGGACCAGTCCACTTCAAGGATGTAGCATTGGCACATATTTTGGTGTATGAGAACAAATCTGCAGTTGGTAGGCATTTGTGTGTTGAAGCTATCTCTCACTATGGTGATTTTGTAGCAAAAGTTGCTGAACTTTATCCAGAGTACAATGTGCCTAAGATGCAACGAGATACCCAACCAGGATTGTTGAGAGTGAAGGATGGATCAAAGAAACTTATGGATTTGGGTTTGCAATTCATTCCAATGGAGAAGATTATAAAGGATGCTGTAGAGGATTTGAAGAGAAAAGGGTTCATTTCATAA 942 0.5032 MEKVVCVTGGSGAIGSWLVHLLLDRGYTVHATVQILNDEAETKHLEALDGAPARLRLFQMDLLDYDSVLATVCGCAGVFHVASPCTIEQVQDPQKELLDPAIKGTLNVLTAAKEAGVRRVVVTSSISAIVPSPNWPGDVPKRENCWTDIEFCKQKGTLAEKAAWDFAKETGLDVVVVNPGTVVGPVIAPRLNASMVMFVRLLQGCDDTYENFFMGPVHFKDVALAHILVYENKSAVGRHLCVEAISHYGDFVAKVAELYPEYNVPKMQRDTQPGLLRVKDGSKKLMDLGLQFIPMEKIIKDAVEDLKRKGFIS 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01852 313 Gene3D - 1 313 - -
Viun8g01852 313 Pfam NAD dependent epimerase/dehydratase family 5 197 IPR001509 -
Viun8g01852 313 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 306 IPR036291 -
Viun8g01852 313 CDD FR_SDR_e 5 290 - -
Viun8g01852 313 FunFam Cinnamoyl-CoA reductase 1 1 313 - -
Viun8g01852 313 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01852 Viun-Chr8 29380400 29382899 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01852 3 313 Monolignol Biosynthesis Gene Families AT5G58490 73.270 7.52e-175 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01852 - - gmx:100803241 550.051