Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01836 ATGGCTGCAGCTTTAGAGTGCTGGTCCAGCCGCGCCACCGCCGCCGCCGACGATGACACGGTGGAGCAGGTTCTCATGCGCACCCACCACAGATCTGAAGGCCCGGCTTCCACCCCTAAAGACCCCTCCTCCATCCCCAACGTCCAGAAGAAGTTCCAGAAGCTCACCCGCAACGTCTCCGAAGCCATAGCCTCCTTCAGAAACTCGCTCAACCTCGATTCACCTCCTTCCTCCAAAGCTGATGCCTCTTCGCGGAAACTTGCCTGGGGAAGTGTCGTTCGCAACCTCACTCAGCTCTACCCCGGAAGCCAACTCCCAGAGAAACTCATGTCCAACATTCGCAAGCATTATGATTCCTTGCCCCTCAGTTATGCACAGGCTGAGTTTGATATGAAGGATGTGTTTCTTCACATAAAGTTGATGGAGCAAGCTTCGGAGAGTGACCAGCCTGCGATTTTGATTCAAGAGGATTGTGATGATGAGGTTCAAGGTTCTGCTCTGAAGCTCACGTTTGCTTGCAACTCTCCGATTTCGTGGCCTGCGATGTCGGGGGCATTGGATAGTTCCTCCATTTGCTGCAAGAGGATTCAGATCTTTGAGAAGAAGGGTTTCACCTTGGGGGTTGTGCTTCTTGTGGTTCAGTCTGGTCATGATAAGTTGGTGAGGACCAGGGTTGAAAATGCTTTGAAGTTTGCAATGAAGAAGCCTAAAACTGGTGCTGTGAAGCTCCCCTTCGGGCTCTGTGGGTGCCAGGAGGAAAATTCTAAAGGGAGAGATCTTGTGGAGATCGAAGAAGAATACGGTGATGGTTACCGTGGAAAGGAATTTGAGAATTCAAGTCAAAGGATTCAGCTTCAGGTGCCTTTGCCTTCTTCATCTTTCGTTGTGTCAGTGGATGAATGGCAGACCATACAGTCAGGTGGGGAAGAGATTGAGAAATGGTTATTGAACTCAGATAGTGTTGAGTTTGTTGAGCAGATTGGGCCAAATTCATACAAGGGAGTATATATGGGGAAGAGGGTTGGGATCGAGAAGCTGAAGGGGTGTGATAAAGGGAATTCTTACGAGTTTGAGCTCCACAAGGATCTGCTGGAACTCATGACTTGTGGTCATAGGAACATTCTGCAGTTCTGCGGTATTTGCGTGGATGATAATCATGGGTTGTGTGTGGTGACCAAGTTCATGGAAGGTGGATCTGTTCATGACCTGATGTTGAAGAACAAGAAGCTCCAGAGTAAGGATATTGTGAGGATTGCAGTTGATGTGGCAGAAGGGATCAAGTTTATGAATGACCATGGTGTTGCATATAGAGACCTTAATACACAGAGAATTCTGTTGGATAGGCATGGAAATGCTTGCTTGGGAGATATGGGTATAGTCACTGCCTGCAAGAGCGTTGGAGAAGCTATGGAGTATGAAACTGATGGTTATAGATGGCTAGCTCCTGAGATAATAGCAGGGGACCCAGAGAATGTGACAGAGACATGGATGAGTAATGTGTATAGTTTTGGGATGGTAATTTGGGAGATGGTAACTGGTGAAGCAGCATACTCTTCATTTTCACCTGTTCAAGCAGCAGTGGGCATTGCTGCATGTGGGCTTAGACCAGAAATCCCAAAAGACTGCCAACAAACTCTAAAATACATTATGACAAAGTGCTGGAACAACACCCCTTCCAAACGCCCTCAGTTCTCTGAAATCTTAGCCATATTGCTGCGACCAAACTGCAACAACAGATAA 1740 0.477 MAAALECWSSRATAAADDDTVEQVLMRTHHRSEGPASTPKDPSSIPNVQKKFQKLTRNVSEAIASFRNSLNLDSPPSSKADASSRKLAWGSVVRNLTQLYPGSQLPEKLMSNIRKHYDSLPLSYAQAEFDMKDVFLHIKLMEQASESDQPAILIQEDCDDEVQGSALKLTFACNSPISWPAMSGALDSSSICCKRIQIFEKKGFTLGVVLLVVQSGHDKLVRTRVENALKFAMKKPKTGAVKLPFGLCGCQEENSKGRDLVEIEEEYGDGYRGKEFENSSQRIQLQVPLPSSSFVVSVDEWQTIQSGGEEIEKWLLNSDSVEFVEQIGPNSYKGVYMGKRVGIEKLKGCDKGNSYEFELHKDLLELMTCGHRNILQFCGICVDDNHGLCVVTKFMEGGSVHDLMLKNKKLQSKDIVRIAVDVAEGIKFMNDHGVAYRDLNTQRILLDRHGNACLGDMGIVTACKSVGEAMEYETDGYRWLAPEIIAGDPENVTETWMSNVYSFGMVIWEMVTGEAAYSSFSPVQAAVGIAACGLRPEIPKDCQQTLKYIMTKCWNNTPSKRPQFSEILAILLRPNCNNR 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01836 579 ProSiteProfiles Protein kinase domain profile. 321 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g01836 579 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 90 571 - -
Viun8g01836 579 Gene3D Transferase(Phosphotransferase) domain 1 314 574 - -
Viun8g01836 579 SUPERFAMILY Protein kinase-like (PK-like) 297 571 IPR011009 -
Viun8g01836 579 PRINTS Tyrosine kinase catalytic domain signature 392 405 IPR001245 GO:0004672|GO:0006468
Viun8g01836 579 PRINTS Tyrosine kinase catalytic domain signature 542 564 IPR001245 GO:0004672|GO:0006468
Viun8g01836 579 PRINTS Tyrosine kinase catalytic domain signature 498 520 IPR001245 GO:0004672|GO:0006468
Viun8g01836 579 PRINTS Tyrosine kinase catalytic domain signature 428 446 IPR001245 GO:0004672|GO:0006468
Viun8g01836 579 MobiDBLite consensus disorder prediction 26 46 - -
Viun8g01836 579 Pfam Protein tyrosine and serine/threonine kinase 356 570 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01836 Viun-Chr8 29251532 29256457 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01836 312 571 MAP Kinase Kinase Kinase AT2G17700 33.708 1.57e-51 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Viun8g01836 PK_Tyr_Ser-Thr 8.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01836 - - pvu:PHAVU_008G258400g 1124.38