Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01829 ATGGAAGAAGTTAAGATTACAGGGAACCTAATAGAAGAAAAAATATGGTCAAAGATACCCATTTTGGTTAAGCCTGTTCCTCTAAGACCTCAACCATGGAGAAAACCCTCCAAGCCACTCCAAAAGCTTCCAACCATTCCAGAAAATGATCAAATTCTTACAGAGGGAAACCTTAATGGAGACCACAACAATTTCAATGAACTCCAACCAAACATTGAGCAAGAAATGAGAAATAAGTTTAAAAGAATCGTCTCAAACAGATATGCTGCACGAAGATCGAGATTGAAGAAACTTGCATACGTTGAGGAGTTGGAAAACGAATTGAAATCATGCGAGAGGAAGAGAGAAGTTCTCCATGGAGAAATTGCAGAGCAACGAAAGAAGCATCTGTCGTTGGAAATTGAGAACCATACATTGAAATTTCATCTGGCTGCTCGTGAAAAGCAAAGAATTCTTCAAGAAGTTGAGATTGAAAAGAACAGAGCAGAAGTTGGTAGAATGATGGAAGTGCAAAGGAGAATGGTTAATTTGAGATCGTTGCAGCTTATGACCAATTCCAACTTTAACCCTTCAGCCTTCATCTGA 585 0.388 MEEVKITGNLIEEKIWSKIPILVKPVPLRPQPWRKPSKPLQKLPTIPENDQILTEGNLNGDHNNFNELQPNIEQEMRNKFKRIVSNRYAARRSRLKKLAYVEELENELKSCERKREVLHGEIAEQRKKHLSLEIENHTLKFHLAAREKQRILQEVEIEKNRAEVGRMMEVQRRMVNLRSLQLMTNSNFNPSAFI 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01829 194 Pfam bZIP transcription factor 79 135 IPR004827 GO:0003700|GO:0006355
Viun8g01829 194 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 81 96 IPR004827 GO:0003700|GO:0006355
Viun8g01829 194 SMART brlzneu 73 138 IPR004827 GO:0003700|GO:0006355
Viun8g01829 194 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 76 139 IPR004827 GO:0003700|GO:0006355
Viun8g01829 194 PANTHER BASIC LEUCINE ZIPPER 34 60 185 - -
Viun8g01829 194 Coils Coil 101 128 - -
Viun8g01829 194 SUPERFAMILY Leucine zipper domain 79 132 IPR046347 GO:0003700|GO:0006355
Viun8g01829 194 Gene3D - 77 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01829 Viun-Chr8 29182677 29193549 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01829 79 154 bZIP Transcription Factor Family AT2G42380 34.211 1.57e-08 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun8g01829 bZIP_1 1e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01829 - - var:108336685 320.087