Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01820 ATGGCGTCGTCGGCGTGCGTCACGGACTTGGCTCGAACGGCGGCGTGTAGGGACGGTGTGGCGGCGGCGCATCTCAAAGTGGTCTCAATCTTCGTTATCTTCCTGACGAGCGTGGCGGGGATGTCGTCGCCGGTGCTCCTGGCCGGGATCTTCCGCGGGAAGCCGCTCTACGACAAGGCCATAGTCGTGATCAAGTGTTTCGCGGCAGGGGTGATTCTCTCCACCTCGCTGGTCCACGTGCTCCCAGACGCGTACGCCGCACTCGCCGACTGCCAGGTGGCGTCGCGCCATCCCTGGAAGGACTTCCCCTTCGCGGGGCTCGTGACGCTTGTGGGCGCTCTTCTGGCGCTCCTGGTGGACCTTGCGGCGAGCTCGCACGTGGAGCACGCGCAGTACGCGCCGGTGGTGGCGCAGGAGAAGGAGTTGGAGCTCGGCGGTGGGTGCCATGGCTCCGGCGGCGACGGTGAAAGAGGTGAAGAATTGGTGAGACTGAAACAGAGGCTGGTTTCGCAGGTGCTTGAGATTGGGATTATTTTTCACTCTGTGATTATCGGAGTTACCATGGGAATGTCTCAGAACGTTTGCACTATTCGACCTCTCGTTGCCGCTTTGGCATTTCATCAAATATTTGAAGGCATGGGTCTCGGTGGTTGCGTCGCTCAGGCAGGATTTAGCTTTGGAACAACAGCATACATGTGCATGATGTTTGCAGTGACAACACCAATGGGGATAATGTTGGGGATGGCATTGTTCTCTCTGACAGGGTACGATGATAGCAATCCAAATGCCTTAATCCTGGAAGGGTTACTGGGTTCAGTTTCATCAGGAATACTAATTTACATGGCCCTTGTTGATCTCATAGCAGTTGACTTTTTTCACAACAAGCTTATGAACTCTACTCCTCGGTTGAAGAAAATATCTTTTCTTGCTTTGACCCTTGGTTCTGCTGCAATGTCTATTCTTGCTCTTTGGGCTTGA 978 0.5481 MASSACVTDLARTAACRDGVAAAHLKVVSIFVIFLTSVAGMSSPVLLAGIFRGKPLYDKAIVVIKCFAAGVILSTSLVHVLPDAYAALADCQVASRHPWKDFPFAGLVTLVGALLALLVDLAASSHVEHAQYAPVVAQEKELELGGGCHGSGGDGERGEELVRLKQRLVSQVLEIGIIFHSVIIGVTMGMSQNVCTIRPLVAALAFHQIFEGMGLGGCVAQAGFSFGTTAYMCMMFAVTTPMGIMLGMALFSLTGYDDSNPNALILEGLLGSVSSGILIYMALVDLIAVDFFHNKLMNSTPRLKKISFLALTLGSAAMSILALWA 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01820 325 PANTHER ZINC/IRON TRANSPORTER 23 319 - -
Viun8g01820 325 Pfam ZIP Zinc transporter 149 322 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Viun8g01820 325 Pfam ZIP Zinc transporter 24 129 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Viun8g01820 325 NCBIfam ZIP zinc/iron transport family 13 325 IPR004698 GO:0005385|GO:0016020|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01820 Viun-Chr8 29143045 29145532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01820 1 325 Inorganic Solute Cotransporters AT2G30080 68.622 2.29e-162 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01820 K14709 - gmx:100797310 513.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g01820 8 29143045 29145532 Viun8g01820 8 29143045 29145532 ECH
Viun6g01160 6 21019587 21021513 Viun8g01820 8 29143045 29145532 ECH
Viun6g01160 6 21019587 21021513 Viun8g01820 8 29143045 29145532 PCT