Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01791 ATGGCTTCCACAACTAGACACCCTTCTCATAGAACCTCTAAACAGCACTTCAAAGTGTGTTTCTGTTTCAGGAGAATGTTTAGGCTCAAAGTCGTTGTACCCCCTGACGAAATCAACACTGTTTTTGAAGAGTATTCACATGATGGCATCATGACCATGGATGATATGTGCGATTTCTTAGTTGAATTTCAAGGAGAAAATGAAGGTGTCACCACACATGCTCAAACCATTTTTGACAGTCTCAAACATCTCAACATATTTCAAAGGAGAGGCTTTCATATTGATGCCTTCTTCCGTTATCTCTTGAGTGACCTTAATGGCCCCCTTGCAGAGGTGTATCATGACATGACTGCTCCTTTGGCTCATTATTTCTTATACACAGGCCACAACTCATACTTAACTGGAAATCAAGTTAGCAGTGCTAGCAGTACTTCTGCGATAATAAACGCATTGAAGAAAGGAGTGAGAGTAATTGAGCTAGATTTATGGCCAAATTCCAGAGGAGACGATGTGTTAGTTCATCATGGAGGGACTCTTACTTCCTCAGTTAAACTTAGACCTTGCCTTATTGCCATTAAGGACTATGCATTTTTGGCCTCTCCATATCCTGTTGTTATAACTTTTGAAGACCATATCACACCATCTCTTCAAGACAAAGTGGCAAAGATGCTCGTTGACACATTTGGAGATTTGTTATTTTATCCTGAAAATTCACACCAAATGAGGGAATTTCCTTCTCCAGAAAGATTGAAGAAAAAAATTCTGATCTCAACTAAACCACCTGACTCTTATGAAAGTCAGGACAAAAGGACACTAGAGGAAGCACCACAGAGGCTTGAGGAATATCATGACAAATCTAGAGTCAATTACAAGGATGACTCAGATGACTCAGATGATGAGGATGATACTCCTGCATATAGGGATTTGATTTCTATTCGTGCAGGGAAGCCTAAAGGTAAGTTAAAAAATTGTCTAATTAATCATAACCAAGTCAGACGCTTAAGCTTGAGCGAGCAAGAGCTTGAAGATATTGCCAAAAATCATGGAACTGACATTATCAGATTCACCCAAAGAAATTTGCTTAGAATATATCCAAAGGGAACTCGTCTCGATTCGTCTAATTACGATCCCATGATTGGATGGATGCATGGAGCTCAAATGGTAGCGTTTAATATGCAGGGAGGAGGACACTATCTTAGGTACATGGAAGGAATGTTCAGAGCCAATGGTGGTTGTGGTTACGTTAAAAAACCAAACATATTATTGAATGTCAACGATATTTTTGATCCAAAAGCACTTCGGCCAGTCAAAACAACTCTTCAGGTTTTGGTATACATGGGTGATGGGTGGCGTTCAGATTTCAGCCCAACGCATTTTGACTTTTATTCTCCTCCTGACTTCCGTGTACAGATTGGTATTCATGGTGTTCCAGCTGATAGAGATACGAAATACACAAGAACAATTGAAGATGATTGGGTACCAGTGTGGAACGAGGAGTTCAGTTTCCCATTGAGAGTTCCTGAATTGGCTCTTCTATACATCAAAGTTGTGGAACGTGATTTTTCTGGAAGCGGTGACTTTGGCGGACAAACATGTTTACCTGTCTCTCAACTCCGACAAGGCATTCGTGCGGTTCGTTTGCGCAACCGCAAGGGCGAACTTTACAAGTCTGTCAGGCTTCTCATCCAATTTCACTTTCTTCATAACACCCTATAG 1716 0.4068 MASTTRHPSHRTSKQHFKVCFCFRRMFRLKVVVPPDEINTVFEEYSHDGIMTMDDMCDFLVEFQGENEGVTTHAQTIFDSLKHLNIFQRRGFHIDAFFRYLLSDLNGPLAEVYHDMTAPLAHYFLYTGHNSYLTGNQVSSASSTSAIINALKKGVRVIELDLWPNSRGDDVLVHHGGTLTSSVKLRPCLIAIKDYAFLASPYPVVITFEDHITPSLQDKVAKMLVDTFGDLLFYPENSHQMREFPSPERLKKKILISTKPPDSYESQDKRTLEEAPQRLEEYHDKSRVNYKDDSDDSDDEDDTPAYRDLISIRAGKPKGKLKNCLINHNQVRRLSLSEQELEDIAKNHGTDIIRFTQRNLLRIYPKGTRLDSSNYDPMIGWMHGAQMVAFNMQGGGHYLRYMEGMFRANGGCGYVKKPNILLNVNDIFDPKALRPVKTTLQVLVYMGDGWRSDFSPTHFDFYSPPDFRVQIGIHGVPADRDTKYTRTIEDDWVPVWNEEFSFPLRVPELALLYIKVVERDFSGSGDFGGQTCLPVSQLRQGIRAVRLRNRKGELYKSVRLLIQFHFLHNTL 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01791 571 Pfam Phosphoinositide-specific phospholipase C, efhand-like 36 104 IPR015359 -
Viun8g01791 571 FunFam Phosphoinositide phospholipase C 434 567 - -
Viun8g01791 571 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 114 259 - -
Viun8g01791 571 CDD C2_PLC_like 437 566 - -
Viun8g01791 571 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 335 421 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Viun8g01791 571 SMART C2_3c 439 547 IPR000008 -
Viun8g01791 571 PRINTS Phospholipase C signature 243 260 IPR001192 GO:0035556
Viun8g01791 571 PRINTS Phospholipase C signature 381 399 IPR001192 GO:0035556
Viun8g01791 571 PRINTS Phospholipase C signature 145 165 IPR001192 GO:0035556
Viun8g01791 571 PRINTS Phospholipase C signature 533 543 IPR001192 GO:0035556
Viun8g01791 571 PRINTS Phospholipase C signature 119 137 IPR001192 GO:0035556
Viun8g01791 571 PRINTS Phospholipase C signature 360 381 IPR001192 GO:0035556
Viun8g01791 571 Pfam Phosphatidylinositol-specific phospholipase C, X domain 116 259 IPR000909 -
Viun8g01791 571 SUPERFAMILY PLC-like phosphodiesterases 114 423 IPR017946 GO:0006629|GO:0008081
Viun8g01791 571 SMART plcy_3 306 422 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Viun8g01791 571 MobiDBLite consensus disorder prediction 257 304 - -
Viun8g01791 571 FunFam Phosphoinositide phospholipase C 111 432 - -
Viun8g01791 571 Gene3D - 30 110 - -
Viun8g01791 571 Pfam C2 domain 468 541 IPR000008 -
Viun8g01791 571 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 15 566 IPR001192 GO:0035556
Viun8g01791 571 Gene3D Phosphatidylinositol (PI) phosphodiesterase 111 432 IPR017946 GO:0006629|GO:0008081
Viun8g01791 571 MobiDBLite consensus disorder prediction 257 293 - -
Viun8g01791 571 Gene3D C2 domain 435 570 IPR035892 -
Viun8g01791 571 SUPERFAMILY EF-hand 27 109 IPR011992 -
Viun8g01791 571 ProSiteProfiles C2 domain profile. 416 549 IPR000008 -
Viun8g01791 571 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 333 419 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Viun8g01791 571 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 439 566 IPR035892 -
Viun8g01791 571 SMART plcx_3 114 259 IPR000909 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01791 Viun-Chr8 28771294 28782553 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01791 13 567 Acyl Lipid Metabolism Gene Families AT3G55940 53.333 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01791 K05857 - gmx:100817915 952.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g01791 8 28771294 28782553 Viun8g01791 8 28771294 28782553 ECH
Viun8g01791 8 28771294 28782553 Viun1g03216 1 40027378 40035311 ECH
Viun8g01791 8 28771294 28782553 Viun8g02337 8 33296058 33301449 ECH