Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01784 ATGAGCAGATACTCGGAGGGCACAACATCAGGAAGCATGGAAGATGAAGATTTGGAGAAGAACAATGAGAAGACAGCAATGGTGAGAAAGAAGTCAGAAGAAGTTGTGGTGGTGGGAAGCAATAACAATGGTGGTTCAGAAATGCTTAGGAATTTTATGACCAATTTGCAAGCGGTGTTTCTTGGTACTAAGCTTGCTGTGCTTTTTCCAGCAGTTCCTTTGGCTGTTGTTGCCACTTTTTATGGCTTTGGAAGGCCTTGGATTTTTGCTTTCAGCCTTCTTGGACTTGCTCCTTTAGCTGAACGTGTCAGCTTTCTGACTGAGCAAATTGCATATTATACTGGTCCAACAGTTGGAGGGCTTCTGAATGCAACCTGTGGCAATGCAACTGAGATGATCATAGCATTATTAGCACTTCATCAGAACAAAGTAAATGTTGTGAAGTTATCCTTGCTTGGTTCCATTCTCTCAAACCTTCTCTTGGTTCTTGGAAGCTCACTCCTCTGTGGTGGTTTAGCCAATCTCAAGAGAGAGCAAAGATATGACAGAAAACAAGCTGATGTAAACTCACTGGTTCTGTTGCTGGGGTTGCTATGTCATTTGCTGCCATTGCTGTTCAGATACTCCTTAGGAGGTGCTCATCATTCCATAGCCACTAACATTCTTCAGATGTCCAGAGCAAGCAGTGTTGTTATGCTTCTAGCATATCTTGCTTACATCTTCTTCCAGTTAAAAACTCACAGAAAATTGTTTGATGCACAAGAGGAGGAGGAAGATGAAGAGAAGGCAGTGATAGGATTTTGGAGTGCATTTACGTGGTTGGTGGGTATGACATTGGTCATATCCTTGCTTTCTGAATATGTAGTAGGAACAATCGAGGCTGCTTCAGATTCTTGGGGGATTTCTGTAAGCTTCATTAGTATAATTTTGCTACCAATTGTTGGAAACGCTGCAGAACATGCTGGTTCAATCATATTTGCTTACAAGAACAAGTTGGACATATCTTTGGGGGTGGCTATGGGATCTGCAACTCAAATTTCTATGTTTGTGGTTCCATTAAGTGTGGTTGTTGCATGGATAATGGGTATAACAATGGATTTGGACTTCAGTCTTCTTGAAACTGGATGTCTTGCTTTTACAATCATAGTTACAGCCTTCACTTTACAGGATGGAACTTCACACTACATGAAAGGAGTGGTTCTTACTCTGTGTTACATTGTCATTGCTGCATGTTTTTTTGTTCTCAAAACTCCTCTAACAGACCAAAATTCTATGGCCAACTTTGGAGCTAAAGCATGGTTTGAAGGCATCAACAGTTGA 1320 0.4129 MSRYSEGTTSGSMEDEDLEKNNEKTAMVRKKSEEVVVVGSNNNGGSEMLRNFMTNLQAVFLGTKLAVLFPAVPLAVVATFYGFGRPWIFAFSLLGLAPLAERVSFLTEQIAYYTGPTVGGLLNATCGNATEMIIALLALHQNKVNVVKLSLLGSILSNLLLVLGSSLLCGGLANLKREQRYDRKQADVNSLVLLLGLLCHLLPLLFRYSLGGAHHSIATNILQMSRASSVVMLLAYLAYIFFQLKTHRKLFDAQEEEEDEEKAVIGFWSAFTWLVGMTLVISLLSEYVVGTIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAYKNKLDISLGVAMGSATQISMFVVPLSVVVAWIMGITMDLDFSLLETGCLAFTIIVTAFTLQDGTSHYMKGVVLTLCYIVIAACFFVLKTPLTDQNSMANFGAKAWFEGINS 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01784 439 NCBIfam calcium/proton exchanger 51 413 - -
Viun8g01784 439 FunFam Vacuolar cation/proton exchanger 260 414 - -
Viun8g01784 439 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 14 416 IPR004713 GO:0006812|GO:0008324|GO:0016020
Viun8g01784 439 NCBIfam calcium/proton exchanger 70 413 IPR004798 GO:0006816|GO:0015369
Viun8g01784 439 FunFam Vacuolar cation/proton exchanger 116 259 - -
Viun8g01784 439 MobiDBLite consensus disorder prediction 1 25 - -
Viun8g01784 439 Gene3D - 265 414 IPR044880 -
Viun8g01784 439 Gene3D - 116 264 IPR044880 -
Viun8g01784 439 Pfam Sodium/calcium exchanger protein 270 411 IPR004837 GO:0016020|GO:0055085
Viun8g01784 439 Pfam Sodium/calcium exchanger protein 87 244 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01784 Viun-Chr8 28730490 28733508 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01784 8 421 Antiporters AT2G38170 65.330 0.0 532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01784 K07300 - gmx:100802344 657.907