Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01758 ATGATTCCTGGAAAAACAGTAGTTGATGTGATCAAGCAGTACAAGGAACTTGAAGCTGATGTTAGCAATATAGAAGCTGGGTTAATCCCAGTTCCTGGCTATAGCACTGCTACTTCACCCTTCACCTTAGATTGGGTGAACACTCCTGGTTATGATGGTTTCAAAGGAAGTGGCAAGAGATCATCCTCAGTGAGACCTCATGAGCAGGAAAGGAAGAAAGGAGTACCTTGGACTGAAGAGGAACATAAATTGTTTCTTCTGGGTCTGAAGAAGTATGGGAAAGGTGATTGGAGAAATATTTCTCGCAACTTTGTGATCTCTAGAACCCCAACACAAGTGGCTAGCCATGCTCAGAAGTACTTCATAAGGCAACTTTCAGGAGGCAAAGACAAGAGAAGGGCTAGCATACATGACATAACAACGGTGAATCTGACAGAAACCACCACAACTTCTTCAGAAGACACCAACAGATCCACCTCACCACATGTGCTCTCACAGCAGCAGCAGCAGCAAAATTCTACTCCAACTACACCCACAACTCATTTTCAGTGGAGTAATCAATCAAGCACAGGAATGGCAATGACTTTCAACCCTGCTCATGAAAGAGTTTTCATGTCTCCTTATGGTGCTAACTCCTTTGGGGTTAAAATGGAAGCACGGAATCTGCATAACGAGTCTTCTTACTTGGGACCTCAGACACAGAACATGGTTTTCCAAATGCAACAGTCCTCACAACACTAG 741 0.4386 MIPGKTVVDVIKQYKELEADVSNIEAGLIPVPGYSTATSPFTLDWVNTPGYDGFKGSGKRSSSVRPHEQERKKGVPWTEEEHKLFLLGLKKYGKGDWRNISRNFVISRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITTVNLTETTTTSSEDTNRSTSPHVLSQQQQQQNSTPTTPTTHFQWSNQSSTGMAMTFNPAHERVFMSPYGANSFGVKMEARNLHNESSYLGPQTQNMVFQMQQSSQH 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01758 246 CDD SANT 76 121 IPR001005 -
Viun8g01758 246 MobiDBLite consensus disorder prediction 61 75 - -
Viun8g01758 246 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 69 125 IPR017930 -
Viun8g01758 246 Pfam Myb-like DNA-binding domain 76 121 IPR001005 -
Viun8g01758 246 ProSiteProfiles Myb-like domain profile. 69 121 IPR001005 -
Viun8g01758 246 NCBIfam myb-like DNA-binding domain, SHAQKYF class 72 124 IPR006447 GO:0003677
Viun8g01758 246 MobiDBLite consensus disorder prediction 147 185 - -
Viun8g01758 246 ProSiteProfiles SANT domain profile. 77 125 IPR017884 -
Viun8g01758 246 SMART sant 73 123 IPR001005 -
Viun8g01758 246 Gene3D - 75 125 - -
Viun8g01758 246 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 194 IPR043363 -
Viun8g01758 246 MobiDBLite consensus disorder prediction 56 75 - -
Viun8g01758 246 FunFam transcription factor MYB1R1 75 126 - -
Viun8g01758 246 SUPERFAMILY Homeodomain-like 70 124 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01758 Viun-Chr8 28547567 28549776 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Viun8g01758 Myb_DNA-binding 1.9e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01758 - - gmx:778034 413.305