Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01732 ATGGGTGCCGTCGTGGAGTGTTACCCGCCGCCGCGTACGGCGGTGCTGTCTCTCAATACGCTGCCGCTGGGCTTCCGTTTTCGTCCCACCGATGAAGAGCTCATTGATTACTACCTGCGCTCGAAGATCAACGGAAACGGGGACGATGTTTGGGTTATCCGTGAGATTGATGTCTGCAAATGGGAGCCTTGGGATTTGCCTGATTTGTCAGTGGTACGGAACAAGGATCCAGAGTGGTTCTTCTTCTGTCCGCAGGATCGGAAGTATCCCAATGGGCACAGGTTGAACCGAGCTACGAACCATGGGTATTGGAAAGCAACGGGGAAGGATCGAAAGATTAAGTCTGGTTCTGCTTTGATCGGAATGAAGAAGACTCTTGTTTTCTACACGGGTCGTGCACCGAAGGGGAAGAGGACCAATTGGGTTATGCATGAGTACAGGCCTACCCTGAAGGAGCTCGATGGTACCAATCCTGGACAGAATCCATATGTCCTCTGTCGGTTATTCAAGAAACATGATGAGAGTCTTGAAGGTTCAAATGGTGAGGATGTGGAGCGGACTGCTTCGACCCCTATGACTGCCAATCACTCTCCAGATGAAATACAATCTGATTCATCTCTGGATCCAGCATCTTCCTCGCAGATCACTGAGGGTGAAAAGCCGCTAACAGTTATCCATGAGAACTCTGAGGAAGCAATATCCAACATTGTAACTCCACTTGACTCCCATAGTGATGGATGTGGTGCACAAAATCAAATTGTAAAACCAGCTGCAGAGGATCAGGCATTTAACTTTGAGGATTTTTATGACCCAACAAAGCAGCAATTATTAGATGACAAATTATTCTCCCCAGTCCATGCTCATTTCCCACCAGAAATTTACTACCAATCTGAACTTCAGTATGGTACAAATGACAATATGTCCGATTTTTTCGACTCGGTTAACTGGGACGCCATCTCCTATGATACTAGCAGTCTTGAGCTAGGTTCATCCTTCCTCAATGTCAAGGACAATGGATCTGGCAGTGACTCAGATGTGGAAATGGCCAATATGACGAATCTGCAGGCATTACATGGTTATCCTAAGGAGGAAGTTGAGCAGAAGAGCAGCAATGTAGGATTATTTCAGAACATTCCTCAGATGGTTTTCTCAAACGATGGTTCTATGGGCCAGGTGGATGATCCGATCAAGAATATTGGCCAACCAAGAGACTTTGATACGTTTGTTAATGGTGATACTGGAATCAGAATAAGACCTCGTCAAGGACGAAATGAACAGCCAAACATGAATGGAATGGTACTACAATCACAAGGCAATGCACCGAGGAGAATAAGATTACATGTCGACCGACAGTTTGCTTCCGCGGCGAAAGATGAAAGCTTTGCTTCTGCCCCAGAAGACCATAATTCAAAAACCACCATTTCTAGGGAGTGGAATGGTTCAGAAAACCATGCTACCGATGAGAGCTGCAGCAGCAGCAGCTCTAGTGATGTGGATGAAGCAGAGAAGGAATCTGCTGAGTCATGTGATGTTGCAAGTGCAGAATTCATCTCAAAAGAGAGCCGAAGGGGGCATCACAGTTCAAAGGTTTCGTCTAACCGTGGCATGTGGTCTTGTGTTCTTGCAGTTTCTGCAACTGTGTTGGTTTCAGTAACAGTGATTGTTAATATATGGGGTTATGTGAGATCTTAA 1692 0.4604 MGAVVECYPPPRTAVLSLNTLPLGFRFRPTDEELIDYYLRSKINGNGDDVWVIREIDVCKWEPWDLPDLSVVRNKDPEWFFFCPQDRKYPNGHRLNRATNHGYWKATGKDRKIKSGSALIGMKKTLVFYTGRAPKGKRTNWVMHEYRPTLKELDGTNPGQNPYVLCRLFKKHDESLEGSNGEDVERTASTPMTANHSPDEIQSDSSLDPASSSQITEGEKPLTVIHENSEEAISNIVTPLDSHSDGCGAQNQIVKPAAEDQAFNFEDFYDPTKQQLLDDKLFSPVHAHFPPEIYYQSELQYGTNDNMSDFFDSVNWDAISYDTSSLELGSSFLNVKDNGSGSDSDVEMANMTNLQALHGYPKEEVEQKSSNVGLFQNIPQMVFSNDGSMGQVDDPIKNIGQPRDFDTFVNGDTGIRIRPRQGRNEQPNMNGMVLQSQGNAPRRIRLHVDRQFASAAKDESFASAPEDHNSKTTISREWNGSENHATDESCSSSSSSDVDEAEKESAESCDVASAEFISKESRRGHHSSKVSSNRGMWSCVLAVSATVLVSVTVIVNIWGYVRS 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01732 563 MobiDBLite consensus disorder prediction 409 430 - -
Viun8g01732 563 Pfam No apical meristem (NAM) protein 22 147 IPR003441 GO:0003677|GO:0006355
Viun8g01732 563 Gene3D NAC domain 30 175 IPR036093 GO:0003677|GO:0006355
Viun8g01732 563 SUPERFAMILY NAC domain 14 171 IPR036093 GO:0003677|GO:0006355
Viun8g01732 563 MobiDBLite consensus disorder prediction 474 496 - -
Viun8g01732 563 MobiDBLite consensus disorder prediction 456 509 - -
Viun8g01732 563 FunFam Nac domain-containing protein 86 30 174 - -
Viun8g01732 563 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 20 250 - -
Viun8g01732 563 MobiDBLite consensus disorder prediction 176 216 - -
Viun8g01732 563 MobiDBLite consensus disorder prediction 182 216 - -
Viun8g01732 563 ProSiteProfiles NAC domain profile. 21 171 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01732 Viun-Chr8 28279549 28282676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01732 14 448 NAC Transcription Factor Family AT4G35580 42.825 1.11e-97 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Viun8g01732 NAM 5.3e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01732 - - gmx:100778903 827.78