Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01731 ATGAAAGCAATAAACTTTTCTGGTAGCATAGCAAAACCCAGTTTTTTGATTGGCCAATCGGAAATGCCTATTCTAACATTTGGTCATTGTAAGCTGAGTGCTACCCTAGCTCTACGGTTATCACGAGATTGCATTAAGAGAATGGAGTTGATTACGAAACTTCAGTATTCTGTTAGTGATAGGACATTTAGTTCTGGTTCGGTGTATTCGCCGTCGCCTGAATCGGAGTCCGGTCGAATGAATCGTCGGCGGGGAGGTTCCTCGTCGATATATAGCCGTCCTAGTTTATCAGAAATGAAGAAAGAGAAGGCTGCACTGAGGGAAAAGGTTTATGAGTTCTTGAAGACAATTGGCATTGTTCCTGATGAACTTGATGGTCTTGAACTTCCTGTGACTGTTGATGTTATGAGGGAGCGCATAGATTTTCTTCATAGTTTGGGGCTAACAATTGAAGACATCAACAACTATCCACTTGTTCTTGGGTGCAGCGTCAAGAAGAACATGATTCCTGTGCTTGACTATCTTGGTAAATTGGGAGTGAGGAAAGCCTCCATTACGTTGTTCTTGCAGAGATACCCACAAGTTCTCCATGCTAGTGTTGTTGTGGATCTTATGCCGGTAGTGAATTATCTTAAGGGGATGGATATCAAGACTGAGGATATTCCTCGTGTTCTTGAGAGGTACCCTGAAGTGCTTGGCTTCAAACTTGAGGGAACCATGAGCACATCGGTTGCTTATTTGATTGGAATTGGTGTAGGAAGAAGACAAATTGGAGGTGTCTTAACTAAATATCCAGAGATTTTGGGTATGCGAGTTGGTAGAATCATTAAGCCTTTTGTGGAGTATCTGGAAAGTTTGGGGATTCCAAAGTTAGCTATTGCTAGATTGATAGAGCAACGACCTTATATTCTTGGATTTGGGCTGAATGAGAAGGTGAAACCAAACGTTAAATCCCTTGAAGATTTTAATGTTAGACGAACATCACTTCCTTCTATAATTGCTCAGTACCCTGACATCATTGGAACTGACTTAAATTCAAAGCTTTTCAATCAGAGAAGTATACTGAATTCGGTGCTTGAATTGGATGCAAAGGACTTTGCCCGAGTTGTTGAGAAGATGCCACAGGTAGTTAGCCTCATTAGGGGACCTATGCTGAAGCATGTTGATTTTCTTAAGGATTGTGGCTTTTCATTGCCTCAGATAAGGAAGATGATTGTTGCATGCCCTCAATTACTCGCTTTAAACATTGACATTATGAAACTTAGCTTTGATTACTTCCAAGTGAAGATGAAAAGGCCTTTGGAAGATTTGGTTACATTCCCTGCATTCTTCACTTATGCTTTGGAGTCAACTATAAAGCCTAGGCATGTGAGGGTTGCCAAGAAAGGGTTAAAGTGTTCTTTGTCATGGATGCTTAATTGTTCTAATGAGAAATTTGAGCAACGAATGGACTATGACACTATTGACATGGAAGAAATGGAAATGGAAATGGAATCATCATTTGACATGGATTCACTAACACAACCAAGGAGTGATGATGAGTCAGATTTTGACTATGACAGTGACGAAGATGATGAGTAG 1581 0.4061 MKAINFSGSIAKPSFLIGQSEMPILTFGHCKLSATLALRLSRDCIKRMELITKLQYSVSDRTFSSGSVYSPSPESESGRMNRRRGGSSSIYSRPSLSEMKKEKAALREKVYEFLKTIGIVPDELDGLELPVTVDVMRERIDFLHSLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVRKASITLFLQRYPQVLHASVVVDLMPVVNYLKGMDIKTEDIPRVLERYPEVLGFKLEGTMSTSVAYLIGIGVGRRQIGGVLTKYPEILGMRVGRIIKPFVEYLESLGIPKLAIARLIEQRPYILGFGLNEKVKPNVKSLEDFNVRRTSLPSIIAQYPDIIGTDLNSKLFNQRSILNSVLELDAKDFARVVEKMPQVVSLIRGPMLKHVDFLKDCGFSLPQIRKMIVACPQLLALNIDIMKLSFDYFQVKMKRPLEDLVTFPAFFTYALESTIKPRHVRVAKKGLKCSLSWMLNCSNEKFEQRMDYDTIDMEEMEMEMESSFDMDSLTQPRSDDESDFDYDSDEDDE 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01731 526 FunFam Transcription termination factor MTERF4, chloroplastic 274 488 - -
Viun8g01731 526 FunFam Transcription termination factor mterf4, chloroplastic 136 273 - -
Viun8g01731 526 MobiDBLite consensus disorder prediction 497 526 - -
Viun8g01731 526 MobiDBLite consensus disorder prediction 62 95 - -
Viun8g01731 526 Gene3D Transcription termination factor 3, mitochondrial 276 489 IPR038538 -
Viun8g01731 526 Gene3D Transcription termination factor 3, mitochondrial 140 275 IPR038538 -
Viun8g01731 526 PANTHER CGI-12 PROTEIN-RELATED 171 483 IPR003690 GO:0003690|GO:0006355
Viun8g01731 526 SMART mt_12 330 362 IPR003690 GO:0003690|GO:0006355
Viun8g01731 526 SMART mt_12 186 217 IPR003690 GO:0003690|GO:0006355
Viun8g01731 526 SMART mt_12 434 465 IPR003690 GO:0003690|GO:0006355
Viun8g01731 526 SMART mt_12 367 397 IPR003690 GO:0003690|GO:0006355
Viun8g01731 526 SMART mt_12 258 289 IPR003690 GO:0003690|GO:0006355
Viun8g01731 526 SMART mt_12 222 253 IPR003690 GO:0003690|GO:0006355
Viun8g01731 526 SMART mt_12 402 433 IPR003690 GO:0003690|GO:0006355
Viun8g01731 526 SMART mt_12 87 120 IPR003690 GO:0003690|GO:0006355
Viun8g01731 526 SMART mt_12 150 181 IPR003690 GO:0003690|GO:0006355
Viun8g01731 526 SMART mt_12 294 325 IPR003690 GO:0003690|GO:0006355
Viun8g01731 526 Pfam mTERF 172 480 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01731 Viun-Chr8 28268657 28270902 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Viun8g01731 mTERF 3.1e-104 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01731 K15032 - gmx:100785223 815.839