Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01727 ATGAAAAAGAGGGGTTTGAAGCATTGTTTCACGTCATCGCAGGTTGTGTTGAGCATGATAATGGTGCAAGGTTTTGTGACAGGGATGCAGCTTCTTTCAAGGGTGATATTGGTTCAGGGTTCCTTCATCTTTTCACTCATTGCTTATCGTCATATTGTTGCTGCAATTTGTGTTGCACCTTTTGCTCTCTACTTTGAAAGAGACCGCACATTGACTTTTACTCCCAAAGTTTGGTTTTGGCTCTTCGTTAACGCATTAATGGGAATGACTCTGGCTCAAGGATTATTCTACTATGGGCTGAGAGATACTTCAGCTACATACTCTGTCAACTTTCTCAACATGGTTCCAATATGCACATTCCTTACCTCTGTCATCTGCAGATTCGAGAAATTGGGACTCCACACTTGGGCTGGTAGAACTAAGTGTGCAGGGGCAATTCTGTGTGTTGGTGGAGCATTACTTACCACTCTCTACAAAGGAAAACAATTTTATCTTCATCATCATACTCATCATGCTCAAACCGCTGTTGCAGCACACCCTACCCACATGCTTCAGGGCACTTTCCTCTTGATCTGCAGCTGCTTCTCATACACAGCTTGGTTTCTTGTGCAAGTACAATTGCTTAAAGTATTTCCATTGAGGTATTGGGGAACAATGCTATCATGCGTTATAGCAGCAATTCAATCAGGAATCGCAGGTGTCTGCATAGATTCTAGTAAGGCTGCATGGAGATTAGAGTGGAATCTGCAACTGCTCACCATAATCTACTCTGGAGCATTGGCCACTGCTGCTACATTCTGCATATTATCATGGGCTGTTGCAATCAAAGGACCTACTTATCCTCCAATGTTCAATCCCCTCTCTCTTATTTTTGTGGCCTTTTTAGAAGCTTTCATACTTGGACAACCACTAACCTTTGGAACGTTGTTGGGCATGGTTTTGATCATGGTGGGGTTGTACTCCTTCTTGTGGGGAAAAAGTAATGAGAAAAAGGGCATGACTCAGCAACCAATTGTGGCAGCTGCAGAAGTATCAAATGTCACTGATTTGATTGCTGGCCCAGAATCAACGGCTACAGTAGTGCCAAGTTCTTCACCACTCAATACTATAACTTTAGTATCTGAAACTCCTTACAAAAACTGA 1143 0.4269 MKKRGLKHCFTSSQVVLSMIMVQGFVTGMQLLSRVILVQGSFIFSLIAYRHIVAAICVAPFALYFERDRTLTFTPKVWFWLFVNALMGMTLAQGLFYYGLRDTSATYSVNFLNMVPICTFLTSVICRFEKLGLHTWAGRTKCAGAILCVGGALLTTLYKGKQFYLHHHTHHAQTAVAAHPTHMLQGTFLLICSCFSYTAWFLVQVQLLKVFPLRYWGTMLSCVIAAIQSGIAGVCIDSSKAAWRLEWNLQLLTIIYSGALATAATFCILSWAVAIKGPTYPPMFNPLSLIFVAFLEAFILGQPLTFGTLLGMVLIMVGLYSFLWGKSNEKKGMTQQPIVAAAEVSNVTDLIAGPESTATVVPSSSPLNTITLVSETPYKN 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01727 380 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 157 - -
Viun8g01727 380 SUPERFAMILY Multidrug resistance efflux transporter EmrE 242 327 - -
Viun8g01727 380 Pfam EamA-like transporter family 186 322 IPR000620 GO:0016020
Viun8g01727 380 Pfam EamA-like transporter family 31 153 IPR000620 GO:0016020
Viun8g01727 380 PANTHER WAT1-RELATED PROTEIN 15 334 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01727 Viun-Chr8 28205939 28213643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01727 11 377 Nodulin-like Gene Family AT5G07050 30.000 8.00e-57 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01727 - - gmx:100792281 588.956