Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01697 ATGGTTTCTTCCCAGTTCTCTGTCTTAAACGAAAACAGTTCACCAAAGTCTTTCCTCAACCAACTGGTTCTACCAAATGGACCACCTGATCTTTTGCCTTCTTCGAATTCTGAGGAATTTGAATTCTCTGATGTGTTTGGTCCATCTCCTTCTGGTGGAAAGGTTTGCAATGATCCTGATTGCATTAACATCCGCTCTCAATCTTTATTTGCTCCCACAACTTGTATTGGTCAGTCCTTGCAGCTTAGCAAGCTCACCTTACATGAGACAGAAGATGCATTGGACCTTGTGGAGGTTTTAACAGAAACACAGAAAGAACTTGAACATTCTGTTAACAATGCAGCAGTAGAGAGACATAATTTACATTTCAATGGTTACTGTCTGAACAATCAGACTATTGGAGTTGAGGATTTTGGACTTCTGAAGGTTGTTGGGCAAGGTGCTTTTGGAAAGGTGTACCAGGTGAAGAGGACAGGTACTTCTGAAATATATGCTATGAAGGTCATGCGCAAGGATAAGATCATAGAGAGAAACCATGCTGAATATGTAAAATCTGAAAGGGATATACTTACAAAGGTGGACAACCCGTTTGTTGTGCGGCTCAGATACGCTTTCCAAACAAAATATAGGCTGTATCTTGTGCTTGATTTTGTCAATGGTGGCCACCTTTTCTTTCAGCTCTATCACCAAGGCCTATTCAGGGAAGATTTGGCACGCTTCTATGCCGCAGAGATTATTTGTGCCGTTTCTTATCTTCATGCAAATGATGTAATGCACAGGGATCTTAAGCCTGAAAACATTCTTCTCGATGCAGATGGTCATGCTGTGTTAACAGATTTTGGCCTGGCTAAGCAATTCAATGGCACTGAAAGATCAAATTCTATGTGTGGAACTGTAGAGTACATGGCCCCTGAAATTGTAATGGGAAAAGGTCATGATAAGGCAGCTGATTGGTGGAGTGTGGGAATTTTACTATATGAAATGCTTACCGGAAAGCCTCCTTTCTGCGGCGGAAATAGACATAAGATCCAGCAGAAGATAATTAAAGACAAAATAAAGCTCCCAGCATTTTTGTCAAATGAGGCACATTCACTGTTAAAAGGGCTGTTGCAGAAAGATGTCAGCAAACGCCTTGGCAGTGGATCAAGAAGCAGTGAGGAGATTAAAAGCCACAAATGGTTTAAGTCTGTGAACTGGAAGAAACTGGAAGCCCGTGAAGTCAGGCCAAGCTTTGTGCCAGATGTTGCTGGGAAGCACTGTGTTGCTAACTTTGAGGAGAGGTGGACTAGTATGCCTTTGCTGGATTCTCCAGCTTCTACTCCCAAAAAGGATCACAGTACCTTCAAGAAGTTCTCATATACTGGTGCTCCAGTTCAGTAA 1380 0.4217 MVSSQFSVLNENSSPKSFLNQLVLPNGPPDLLPSSNSEEFEFSDVFGPSPSGGKVCNDPDCINIRSQSLFAPTTCIGQSLQLSKLTLHETEDALDLVEVLTETQKELEHSVNNAAVERHNLHFNGYCLNNQTIGVEDFGLLKVVGQGAFGKVYQVKRTGTSEIYAMKVMRKDKIIERNHAEYVKSERDILTKVDNPFVVRLRYAFQTKYRLYLVLDFVNGGHLFFQLYHQGLFREDLARFYAAEIICAVSYLHANDVMHRDLKPENILLDADGHAVLTDFGLAKQFNGTERSNSMCGTVEYMAPEIVMGKGHDKAADWWSVGILLYEMLTGKPPFCGGNRHKIQQKIIKDKIKLPAFLSNEAHSLLKGLLQKDVSKRLGSGSRSSEEIKSHKWFKSVNWKKLEAREVRPSFVPDVAGKHCVANFEERWTSMPLLDSPASTPKKDHSTFKKFSYTGAPVQ 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01697 459 ProSiteProfiles AGC-kinase C-terminal domain profile. 395 459 IPR000961 GO:0004674|GO:0005524|GO:0006468
Viun8g01697 459 ProSiteProfiles Protein kinase domain profile. 138 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g01697 459 Gene3D Phosphorylase Kinase; domain 1 136 437 - -
Viun8g01697 459 SMART pkinase_C_6 395 455 IPR000961 GO:0004674|GO:0005524|GO:0006468
Viun8g01697 459 Pfam Protein kinase domain 141 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g01697 459 CDD STKc_AGC 144 394 IPR045270 GO:0004674|GO:0005524
Viun8g01697 459 Gene3D Transferase(Phosphotransferase) domain 1 218 413 - -
Viun8g01697 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 257 269 IPR008271 GO:0004672|GO:0006468
Viun8g01697 459 SMART serkin_6 138 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g01697 459 FunFam Non-specific serine/threonine protein kinase 218 413 - -
Viun8g01697 459 FunFam Non-specific serine/threonine protein kinase 135 240 - -
Viun8g01697 459 ProSitePatterns Protein kinases ATP-binding region signature. 144 167 IPR017441 GO:0005524
Viun8g01697 459 SUPERFAMILY Protein kinase-like (PK-like) 125 440 IPR011009 -
Viun8g01697 459 PANTHER RIBOSOMAL PROTEIN S6 KINASE 101 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01697 Viun-Chr8 27983749 27987709 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01697 1 457 AGC Kinase Gene Family AT3G08720 63.034 0.0 589
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Viun8g01697 Pkinase 1.9e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01697 K04688 - gmx:100803509 768.459