Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01686 ATGCCTACTGTATCACCAATTGAAAAGGTTGGAAAGTATGTTGGCCCAGAAGAGTGGAATGCTTTGATCAATGAGCCAGATACAGTGGTTATTGATGTGCGAAATAACTATGAAACCAGAATAGGAAAGTTTAAAGGAGCAGTTGATCCATGTACTACATCATTTCGTGAATTCCCGTCTTGGGTAGAGGAGCATTTCCAGCTTAGCGAAACAGATGATAGTGAGAATCCAAAACTTGAGTTAAACAATTCAGTCCAACCTGCTGAAAAAGAAATGGAGAATCAAAAACAACAAATGCCACGTGTTGCAATGTATTGCACTGGAGGTATTCGTTGTGAGAAAGCTACAAGTCTACTTCTCAGCAAAGGTTTCAAAGAGGTTTATCACCTGGAAGGTGGAATTCTAAAATATCTCGAAGAGGTTCCAGAAACAGAAAGCCTCTGGGAAGGGGAGTGCTTTGTTTTCGACAAACGAGTCTCTGTGGAGCATGGCTTGGTGCCAGGAAATTTCAAACTCTGCTATGGCTGTAAACAGCCTGTGAGTGATGCTGACATGGAGGCCCCAGAATTTGAATATGGAGTTTCCTGTCCTCACTGTTTTGCACTGAAATCTGATGAAGAGAAGGAGAGAGCTCGAGCTCGACAAAGACAATTTGAGAGATGGGGAATCATAGGTGGTCCAGACAAGGGTCGCCGCCCAACTACTCAAGAACCGGAAAGTGCTAGCAGGAATCCAAACCAGCTTTCACGTTCTATTTAA 759 0.4321 MPTVSPIEKVGKYVGPEEWNALINEPDTVVIDVRNNYETRIGKFKGAVDPCTTSFREFPSWVEEHFQLSETDDSENPKLELNNSVQPAEKEMENQKQQMPRVAMYCTGGIRCEKATSLLLSKGFKEVYHLEGGILKYLEEVPETESLWEGECFVFDKRVSVEHGLVPGNFKLCYGCKQPVSDADMEAPEFEYGVSCPHCFALKSDEEKERARARQRQFERWGIIGGPDKGRRPTTQEPESASRNPNQLSRSI 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01686 252 SMART rhod_4 14 143 IPR001763 -
Viun8g01686 252 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 2 172 IPR036873 -
Viun8g01686 252 Coils Coil 78 98 - -
Viun8g01686 252 CDD RHOD_YceA 11 139 - -
Viun8g01686 252 Pfam Rhodanese-like domain 17 139 IPR001763 -
Viun8g01686 252 MobiDBLite consensus disorder prediction 237 252 - -
Viun8g01686 252 Gene3D - 1 179 IPR036873 -
Viun8g01686 252 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 7 229 IPR020936 -
Viun8g01686 252 ProSiteProfiles Rhodanese domain profile. 24 146 IPR001763 -
Viun8g01686 252 MobiDBLite consensus disorder prediction 211 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01686 Viun-Chr8 27878011 27881950 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01686 1 252 Sulfurtransferasese or Rhodanese AT2G40760 70.079 2.92e-129 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01686 - - gmx:100784854 469.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g01686 8 27878011 27881950 Viun8g01686 8 27878011 27881950 ECH