Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01682 ATGCAAATTCAAGCAAAACAAAACGAAGAAAGCAAAGACCAGAAAAAAACATCAAGAAAAACCGAAGCTACAACCTCAGGCTTTCAGAAAATGAAAACGAATCTTTGCCCTGAAAGTGAAAGTGTCTCAGCCCAGAAGAAGAGAGAGCTAATGGAAGATCTTGTTAAGGGTCATGAAGCTGCTACTGAACTAAGACTTCTGCTTCAGAACCCCTTTGGAACTCAACCCTCTCTCTCTTCTTCTCATCACCTCATAGCCAAGGTCCTCAGATCTTTCACACAAGCTCTTACTATTATCAATTCTTCTCCTTTCGCACCTGTTTCCGGCCAAAATGGGCCGTCTGTGCCCCGTTCCGGCAACCGTCCAAGATCTGGAGATTGCAGTGAGAAGAGATCCAAAAACGGTGGGAGAGGTCGCTACAACAGAAGAAAGAGTGTACTCACATGGACTGAGCTATCTTACAATACTGATGACAATCATGCATGGAGGAAGTATGGACAAAAGAAAATTCTGAATTCTGAATTCCCTAGGAGTTACTTCAGGTGCAGTCATAGGTATGATAAAGGTTGCAAAGCAACGAAACAAGTGCAGAGGGATGAACAGTATCCTCAGATGTATCAAACTACTTACATTGGCTCTCACACATGCAATGAAATCTCTGAGGTTGTAACAAACTCAACCACAGATTCTTCCACTTATTGGGAATCTTATCTTCTGAATTCTGATCATGACTCTGATCATGTGCATGAAACCCTAGTTTGCTCACCAAAAATGTAA 777 0.4208 MQIQAKQNEESKDQKKTSRKTEATTSGFQKMKTNLCPESESVSAQKKRELMEDLVKGHEAATELRLLLQNPFGTQPSLSSSHHLIAKVLRSFTQALTIINSSPFAPVSGQNGPSVPRSGNRPRSGDCSEKRSKNGGRGRYNRRKSVLTWTELSYNTDDNHAWRKYGQKKILNSEFPRSYFRCSHRYDKGCKATKQVQRDEQYPQMYQTTYIGSHTCNEISEVVTNSTTDSSTYWESYLLNSDHDSDHVHETLVCSPKM 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01682 258 MobiDBLite consensus disorder prediction 102 141 - -
Viun8g01682 258 SMART WRKY_cls 156 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun8g01682 258 ProSiteProfiles WRKY domain profile. 157 214 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun8g01682 258 SUPERFAMILY WRKY DNA-binding domain 154 217 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun8g01682 258 MobiDBLite consensus disorder prediction 1 32 - -
Viun8g01682 258 Gene3D WRKY domain 142 218 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun8g01682 258 MobiDBLite consensus disorder prediction 102 118 - -
Viun8g01682 258 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 54 229 IPR044810 GO:0003700
Viun8g01682 258 Pfam WRKY DNA -binding domain 157 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01682 Viun-Chr8 27834254 27842573 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01682 46 245 WRKY Transcription Factor Family AT3G56400 42.105 1.97e-43 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun8g01682 WRKY 2.5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01682 - - vum:124822494 383.645