Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01677 ATGCCGAATCCCGAGGCTAACCGCAGCCAAAACTCCCGCTCCCGGGCCCGTCCGTCTACGTCAGCGGCGCCGCGGCAGCCGGTCAGGGCCCGGGCCTCGCTGCGCCAGCTGCTGCGCGTGGCGTCAGTGGCGAGCGGTATTCAGTTCGGTTGGGCCTTGCAGCTCTCCCTCCTCACTCCCTACGTCCAGCAGCTTGGCATCCCTCACCAATGGGCCAGCATCATCTGGCTCTGCGGCCCGGTCTCCGGCCTCTTCGTCCAGCCTCTCGTCGGCCACATGAGCGACCGCTGCACCAGCCGCTTCGGCCGCCGCCGCCCCTTCATCTTCGTCGGCGCTGTCGCCATCGTGATCGCCGTCGTCATCATCGCCTACGCCGCTGACATCGGCTGGATCCTTGGCGACACCGCCACCTACCGACCGGCTGCCATAACTGTCTTCATAATCGGCTTTTGGATCCTCGACGTCGCCAACAACGTCACGCAAGGTCCCTGTCGAGCCTTGCTCAGTGATCTCACCAGCAAGGATTCTCGAAGGACACGTGTTGCAAATGCTTACTACTCACTGTTTATGGCCATTGGTAATATTCTTGGCTATGCAACTGGATCATACAGTGGTTGGTACAAGATTTTCCCTTTTACACTTTCCCCTGCTTGCACAATTAGTTGTGCAAATCTCAAGTCTGCTTTCTTTCTTGACATTGCTTTCATTGCGGTCACAACATATATCAGCATCATGGCAGCTCATGAAGTGCCTCTAAATTCTAATGTGGTGGCCCACGCTGAAGCAGTGGCCGAGGAGTCAGGTAGTGCCGAAGAAGCTTTCATGTGGGAATTATTTGGGACATTCAAATATTTTTCGACCCCTGTGTGGATAATTTTGTCTGTTACTGCTCTCACATGGACTGGGTGGTTTCCATTTACTCTATTTGATACGGATTGGATGGGTCGAGAGATTTATGGTGGTGATCCAAATCAAGGCCTTATTTATGATACTGGAGTTAGAATGGGAGCACTTGGTTTGTTGCTTAATTCAGTTGTTCTTGCATTGACATCATTGCTCATGGAAAGGTTATGCAGGAAGAGGGGGGCTGGTTTTGTGTGGGGAATCTCAAATATCGTGATGACATTTTGCTTTCTTGCAATGCTTGTATTAACCTATGTGGCAAGTAGCATGGGCTATGCAGGCAAAGATCTACCTCCACCTGGCATTGTGATAGCCGCATTGATTATCTTTACCATTCTTGGATTTCCCCTGGCAATCACTTACAGTGTTCCGTATGCCTTAATTTCCACACATATCGAGTCTTTGGGACTTGGGCAAGGGTTATCAATGGGTGTCCTAAATCTGGCAATAGTGGTCCCACAGATAATAGTGTCCCTGGGAAGTGGACCATGGGATCAGCTATTTGGTGGAGGAAACTCCCCAGCCTTTGCTGTGGGAGCTGTTTCAACCATTATCAGTGGACTCATGGCTATATTGGCTATTCCTCGATCTGGTGCTCAAAAGGCTCGAAGTCATGCGTGA 1524 0.5157 MPNPEANRSQNSRSRARPSTSAAPRQPVRARASLRQLLRVASVASGIQFGWALQLSLLTPYVQQLGIPHQWASIIWLCGPVSGLFVQPLVGHMSDRCTSRFGRRRPFIFVGAVAIVIAVVIIAYAADIGWILGDTATYRPAAITVFIIGFWILDVANNVTQGPCRALLSDLTSKDSRRTRVANAYYSLFMAIGNILGYATGSYSGWYKIFPFTLSPACTISCANLKSAFFLDIAFIAVTTYISIMAAHEVPLNSNVVAHAEAVAEESGSAEEAFMWELFGTFKYFSTPVWIILSVTALTWTGWFPFTLFDTDWMGREIYGGDPNQGLIYDTGVRMGALGLLLNSVVLALTSLLMERLCRKRGAGFVWGISNIVMTFCFLAMLVLTYVASSMGYAGKDLPPPGIVIAALIIFTILGFPLAITYSVPYALISTHIESLGLGQGLSMGVLNLAIVVPQIIVSLGSGPWDQLFGGGNSPAFAVGAVSTIISGLMAILAIPRSGAQKARSHA 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01677 507 MobiDBLite consensus disorder prediction 1 21 - -
Viun8g01677 507 SUPERFAMILY MFS general substrate transporter 35 499 IPR036259 -
Viun8g01677 507 PANTHER SUGAR TRANSPORTER 31 493 - -
Viun8g01677 507 Pfam MFS/sugar transport protein 52 434 - -
Viun8g01677 507 CDD MFS_SLC45_SUC 37 493 - -
Viun8g01677 507 Gene3D MFS general substrate transporter like domains 30 494 IPR036259 -
Viun8g01677 507 FunFam Sucrose transport protein 31 495 - -
Viun8g01677 507 MobiDBLite consensus disorder prediction 1 28 - -
Viun8g01677 507 NCBIfam sucrose/proton symporter 33 498 IPR005989 GO:0005886|GO:0008515|GO:0015770
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01677 Viun-Chr8 27780411 27789646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01677 5 502 Sucrose Transporter Gene Family AT1G09960 69.048 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01677 K15378 - gmx:100820483 872.078