Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01661 ATGGATTCCCGCGACTCCTCCCCACGCTCCCGCGACCCCGACGCCGACAACCACCACCACCACCACTCCTTCGACGAGCCCCCGCCCTCCCTCCATTCCAAGGTCAAGCTCATGTGCAGCTACGGCGGCCGAATCCAGCCTCGCCCCCACGACAACCACCTCACCTACGTCGCCGGCGACACCAAGATCCTCGCCGTAGACCGCCACATCAAGCTCCCCGCCCTCCTCACCAGACTCTCCTCCCTCGCCAACGCCCCCGCCGATGCCACCTTCTTCAAGTACCAGCTCCCCGGCGAGGACCTCGACGCTCTCATCTCCGTCACCAACGATGAAGACCTCCACCACATGATGCTCGAGTACGATCGCCTCTCCCGCACCTCGCCTAGACCCGCACGCCTCCGCCTCTTTCTGTTCTCGCTCCACAACAACAGCAACGGCAACGGCAACATCAATTTCGCACTCACCGATTCCAAACCCGAGCGCCAGTGGTTCGTCGACGCTCTCAACTCCGTTCAGGTGCCGCTTGTCGAAGGTTCTCCGCCGCCGCCTACGGCAGCGCCAAATCCAGATTTTCTCTTTGGATTAGATAAGCCGCCGTCGGCTTCCAATACGCCGGCGAAGAATCCTACGCCGGAAACGGAATGCATCTCCGAGGACCGTCCAGCGGTTAGAGATCCCGAAACCGAAACGGAACGCGCGCCCGAGTCAGAGATTCGGAGGTTGCAGATTGGTAACAATAATGAACAGCAACTCCTGCAACAGAAGATGAAAATAGAGGAAGATAATAACGGTGGGGTTCACGGGGTTAACGGCGCGGAAGGTTTCTCTCAAAAGAACACGGAGAATGTGACGCCGTTAGTTACGCAAGGGCAAATGCAGGCGCAAGGATTTCATTCTGGAACGGTGTCGTTTTTGCAGGAGAGGAATAATGTGGGTTATTCGCTGGCGGTTCCTACGACCGGGAGTGAGATTTATCTCATTCAGACGCCTTCTGGAATCTTCCAAGCGGTTCGGCCCGTGACTGGACCGGTGGGGCAACCGGTTTATCTGGTTCCGGCGCCTAGTTCGGTTGGTGTGGCGGCGGAGCGTGGATATTCTGCTGGACAGGGAGCAGCGCGGTGGTGA 1125 0.5876 MDSRDSSPRSRDPDADNHHHHHSFDEPPPSLHSKVKLMCSYGGRIQPRPHDNHLTYVAGDTKILAVDRHIKLPALLTRLSSLANAPADATFFKYQLPGEDLDALISVTNDEDLHHMMLEYDRLSRTSPRPARLRLFLFSLHNNSNGNGNINFALTDSKPERQWFVDALNSVQVPLVEGSPPPPTAAPNPDFLFGLDKPPSASNTPAKNPTPETECISEDRPAVRDPETETERAPESEIRRLQIGNNNEQQLLQQKMKIEEDNNGGVHGVNGAEGFSQKNTENVTPLVTQGQMQAQGFHSGTVSFLQERNNVGYSLAVPTTGSEIYLIQTPSGIFQAVRPVTGPVGQPVYLVPAPSSVGVAAERGYSAGQGAARW 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01661 374 Gene3D - 55 139 - -
Viun8g01661 374 MobiDBLite consensus disorder prediction 1 31 - -
Viun8g01661 374 SUPERFAMILY CAD & PB1 domains 50 145 - -
Viun8g01661 374 Pfam PB1 domain 51 138 IPR000270 GO:0005515
Viun8g01661 374 MobiDBLite consensus disorder prediction 175 246 - -
Viun8g01661 374 PANTHER OS05G0427100 PROTEIN-RELATED 2 276 - -
Viun8g01661 374 MobiDBLite consensus disorder prediction 1 29 - -
Viun8g01661 374 CDD PB1_UP2 38 138 - -
Viun8g01661 374 MobiDBLite consensus disorder prediction 213 238 - -
Viun8g01661 374 SMART PB1_new 49 140 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01661 Viun-Chr8 27577069 27578706 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01661 34 179 MAP Kinase Kinase Kinase AT5G57610 41.497 1.38e-26 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01661 - - vra:106764239 663.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g01661 8 27577069 27578706 Viun8g01661 8 27577069 27578706 ECH