Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01630 ATGCCTCACAGAGCGACTTACTTTTTCCCGAGGCAGTTCCCGGAGAGGGGTTTGGATGAGTCTTCCAAGCAGAGATTGGATCATGAAAAGAGAAAACTCGTCAACTCTATCAAATCATCTGATACGACTTTTGCATATGAAAGCGACGCGCCGAAAAAGCCAACACCGATTCCCACGCCTGCTGCTAAAGACAACGACGACGTCGTTTTCTCATCCGGTAAGCAATCCGCAGTCTCCGACCTATTCACCGGTGCCGACAAGTTCCGCACCAAGCAGAAGCAAATCGCCGCCTTCTGCGATTGGTTGATCGACAAAAAGAAGGACATCAACCGACCTAGTCACCGTTTAAGGACCTATCCGAACGACGAGGAGGAGGAAGAAGATGAACGTGAGCTTCTGCTTCCACCGCCGCCGCCGCCTGCGTCGGCGGCCGCGCAGGTGGTGAAGGATGCTGTTGACCGGAGCTTCGATCGGCAGGTTTCTCTCCCGCGGTTGTCCAGCGGGAGCAGCTACGCCGGAAGCTTGTTCACGCTGGACGGCACCGCCACATTCTCCAGCGACGTTACGAAAGACGAAACGTCGTCGTTTCAAGTCTTTACTGAAGAAGACGCGAGAAAAAGGAAAGAAGAGGAAGAAAACGTAAAACTCAATACGGCTCAGAAGTATAAGGAGAGCTACTACCTGCAACTGACGTTGGCGCAGAGACTCTCTTTTTTAGCAAGCCTCGCTTCTGAACCTGTTCTCGCACTCGACGCTGGTCCCGAAACCTGGGACGCTGAATCCGTTTCGTATCGTTTATGGGTGAGTGGATGTTTGTCGTACACGGACAAGATATCTGACGGATTTTACAACATACTGGGGATGAATCCATACCTGTGGGTGATGTGCAATGATGTTGAGGAAGAAGGGAAGCGTTTACCGACGCTGATGGCGCTTAAGGCGGTTGAACCTAGCGAGACTTCCATAGAGGTAGTTTTTTTCGATAGACAAGAGGACTCTCGGCTTAAGCAGCTTCAAGATAAAGCTCAGGAGTTGTATTCTGCTTCGGAGAACGCGTTGGTGCTGGTGGAGAAACTCGGAAAACTCGTTGCCATATGCATGGGGGGTACGTTTCCTGTGGAGCAAGGAGATCTACACAAGCGGTGGAAGTTGGTTAGCAAGAGGTTGAGGAACTTTCACCAATGTGTTGTGCTTCCTGTTGGTAGCTTATCCAGTGGACTCTGTAGGCATCGCGCGATTCTCTTCAAGAGATTGGCAGATTACATTGGTTTGCCATGCCGCATTGCCCGAGGTTGTAGATACTGTGTTTCAGATCATAGATCGTCCTGCCTTGTCAAGATTAAAGATGACAGACAGCTCTCAAGAGAATATGTAGTTGATCTGGTTGGAGAACCAGGAAATATCCTTGGGCCAGATTCCTCAATTAACGGAGCATATGCGTCATCAATACCTTCCCCATTTCAAATTTCTCATTTGAAAGAATCCCAATCTCCATATGTGGATGCTACAGCATGTTCTCAATCTCTTGATAACACTTATTCAGGCTTTGTACAAGAAGATCAACGAGTTGACGAAACTGATCGACAGAAAAATAATAATGGCTCTATTTATTCTGCAATAGATCAAACTCGTGGAGGTACAGAACAACCTCTATTTCCTTGTGGCTTGAAAGGGAATGATAAGGAATGTGCTGTTCTGGGTTTATTAAATTTTCCTCCCATCTATGAAGGTGTTTCTGAAGATCTCGACGAAGTCTCTGGAGCACCAATCCATGAATACCCTAGGCTCAGTAAAGATTCAGTTGTAGTTATAGAAGCTTCCAAAGAGATCGTTGTAAAGGGGAGTTCTGGGGTAAAAAGCATCTATAAGCAATCTATACTGAGCTCATCCACCGAACCAGAACAGGAACACGTAAAAAATAAACTTGAAAATCAGGGTGCTGGTAATATTCCAAGATACTTGAATCTTGAACCGTCACTTGCAATGGACTGGCTTGAGATACCATGGGACGATTTACGAATCAAAGAGCGTGTTGGTGCTGGATCATTTGGGACAGTGTATCGTGCTGAATGGCATGGATCGGATGTTGCTGTCAAGGTTTTAACAGTTCAGGATTTCCAGGATGATCAGTTGAAAGAATTTCTGAGAGAGGTTGCCATAATGAAACGAGTTCGTCATCCAAATGTGGTGCTTTTCATGGGTGCGGTTACTAAACGTCCACATCTATCTATAGTAACAGAATATTTGCCTAGGGGCAGTTTATTCCGCCTAATTCATAAGCCAGCATCTGGTGAAATTCTAGATCCTAGGAGAAGGTTACGAATGGCTTTAGACGTGGCTAAAGGGATAAATTATCTCCACTGTTTGAAGCCTCCAATTGTGCACTGGGATCTGAAAACCCCGAACTTGTTAGTGGACAGAAATTGGACTGTCAAGGTGTGTGATTTTGGATTGTCCAGATTTAAGGCGAACACTTTCTTGTCATCAAAATCTGTTGCTGGAACTGTTGAACTTTCACTTCAGGTGCCACATCTTCAATAA 2541 0.4616 MPHRATYFFPRQFPERGLDESSKQRLDHEKRKLVNSIKSSDTTFAYESDAPKKPTPIPTPAAKDNDDVVFSSGKQSAVSDLFTGADKFRTKQKQIAAFCDWLIDKKKDINRPSHRLRTYPNDEEEEEDERELLLPPPPPPASAAAQVVKDAVDRSFDRQVSLPRLSSGSSYAGSLFTLDGTATFSSDVTKDETSSFQVFTEEDARKRKEEEENVKLNTAQKYKESYYLQLTLAQRLSFLASLASEPVLALDAGPETWDAESVSYRLWVSGCLSYTDKISDGFYNILGMNPYLWVMCNDVEEEGKRLPTLMALKAVEPSETSIEVVFFDRQEDSRLKQLQDKAQELYSASENALVLVEKLGKLVAICMGGTFPVEQGDLHKRWKLVSKRLRNFHQCVVLPVGSLSSGLCRHRAILFKRLADYIGLPCRIARGCRYCVSDHRSSCLVKIKDDRQLSREYVVDLVGEPGNILGPDSSINGAYASSIPSPFQISHLKESQSPYVDATACSQSLDNTYSGFVQEDQRVDETDRQKNNNGSIYSAIDQTRGGTEQPLFPCGLKGNDKECAVLGLLNFPPIYEGVSEDLDEVSGAPIHEYPRLSKDSVVVIEASKEIVVKGSSGVKSIYKQSILSSSTEPEQEHVKNKLENQGAGNIPRYLNLEPSLAMDWLEIPWDDLRIKERVGAGSFGTVYRAEWHGSDVAVKVLTVQDFQDDQLKEFLREVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLPRGSLFRLIHKPASGEILDPRRRLRMALDVAKGINYLHCLKPPIVHWDLKTPNLLVDRNWTVKVCDFGLSRFKANTFLSSKSVAGTVELSLQVPHLQ 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01630 846 MobiDBLite consensus disorder prediction 37 68 - -
Viun8g01630 846 ProSiteProfiles Protein kinase domain profile. 672 846 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g01630 846 Gene3D Transferase(Phosphotransferase) domain 1 751 839 - -
Viun8g01630 846 MobiDBLite consensus disorder prediction 112 142 - -
Viun8g01630 846 Pfam Ethylene-responsive protein kinase Le-CTR1 259 468 - -
Viun8g01630 846 SMART serkin_6 672 846 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g01630 846 FunFam Serine/threonine-protein kinase isoform 1 662 750 - -
Viun8g01630 846 Pfam Protein tyrosine and serine/threonine kinase 672 824 IPR001245 GO:0004672|GO:0006468
Viun8g01630 846 ProSitePatterns Serine/Threonine protein kinases active-site signature. 793 805 IPR008271 GO:0004672|GO:0006468
Viun8g01630 846 Gene3D Phosphorylase Kinase; domain 1 665 749 - -
Viun8g01630 846 CDD STKc_MAP3K-like 678 836 - -
Viun8g01630 846 SUPERFAMILY Protein kinase-like (PK-like) 653 836 IPR011009 -
Viun8g01630 846 ProSitePatterns Protein kinases ATP-binding region signature. 678 699 IPR017441 GO:0005524
Viun8g01630 846 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 196 836 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01630 Viun-Chr8 27189586 27205197 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01630 1 837 MAP Kinase Kinase Kinase AT4G24480 53.750 0.0 848
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Viun8g01630 EDR1 2.9e-74 CL0125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01630 - - gmx:100786546 1427.92