Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01629 ATGCCTCACAGAGCGACTTACTTTTTCCCGAGGCAGTTCCCGGAGAGGGGTTTGGATGAGTCTTCCAAGCAGAGATTGGATCATGAAAAGAGAAAACTCGTCAACTCTATCAAATCATCTGATACGACTTTTGCATATGAAAGCGACGCGCCGAAAAAGCCAACACCGATTCCCACGCCTGCTGCTAAAGACAACGACGACGTCGTTTTCTCATCCGGTAAGCAATCCGCAGTCTCCGACCTATTCACCGGTGCCGACAAGTTCCGCACCAAGCAGAAGCAAATCGCCGCCTTCTGCGATTGGTTGATCGACAAAAAGAAGGACATCAACCGACCTAGTCACCGTTTAAGGACCTATCCGAACGACGAGGAGGAGGAAGAAGATGAACGTGAGCTTCTGCTTCCACCGCCGCCGCCGCCTGCGTCGGCGGCCGCGCAGGTGGTGAAGGATGCTGTTGACCGGAGCTTCGATCGGCAGGTTTCTCTCCCGCGGTTGTCCAGCGGGAGCAGCTACGCCGGAAGCTTGTTCACGCTGGACGGCACCGCCACATTCTCCAGCGACGTTACGAAAGACGAAACGTCGTCGTTTCAAGTCTTTACTGAAGAAGACGCGAGAAAAAGGAAAGAAGAGGAAGAAAACGTAAAACTCAATACGGCTCAGAAGTATAAGGAGAGCTACTACCTGCAACTGACGTTGGCGCAGAGACTCTCTTTTTTAGCAAGCCTCGCTTCTGAACCTGTTCTCGCACTCGACGCTGGTCCCGAAACCTGGGACGCTGAATCCGTTTCGTATCGTTTATGGGTGAGTGGATGTTTGTCGTACACGGACAAGATATCTGACGGATTTTACAACATACTGGGGATGAATCCATACCTGTGGGTGATGTGCAATGATGTTGAGGAAGAAGGGAAGCGTTTACCGACGCTGATGGCGCTTAAGGCGGTTGAACCTAGCGAGACTTCCATAGAGGTAGTTTTTTTCGATAGACAAGAGGACTCTCGGCTTAAGCAGCTTCAAGATAAAGCTCAGGAGTTGTATTCTGCTTCGGAGAACGCGTTGGTGCTGGTGGAGAAACTCGGAAAACTCGTTGCCATATGCATGGGGGGTACGTTTCCTGTGGAGCAAGGAGATCTACACAAGCGGTGGAAGTTGGTTAGCAAGAGGTTGAGGAACTTTCACCAATGTGTTGTGCTTCCTGTTGGTAGCTTATCCAGTGGACTCTGTAGGCATCGCGCGATTCTCTTCAAGAGATTGGCAGATTACATTGGTTTGCCATGCCGCATTGCCCGAGGTTGTAGATACTGTGTTTCAGATCATAGATCGTCCTGCCTTGTCAAGATTAAAGATGACAGACAGCTCTCAAGAGAATATGTAGTTGATCTGGTTGGAGAACCAGGAAATATCCTTGGGCCAGATTCCTCAATTAACGGAGCATATGCGTCATCAATACCTTCCCCATTTCAAATTTCTCATTTGAAAGAATCCCAATCTCCATATGTGGATGCTACAGCATGTTCTCAATCTCTTGATAACACTTATTCAGGCTTTGTACAAGAAGATCAACGAGTTGACGAAACTGATCGACAGAAAAATAATAATGGCTCTATTTATTCTGCAATAGATCAAACTCGTGGAGGTGTTTCTGAAGATCTCGACGAAGTCTCTGGAGCACCAATCCATGAATACCCTAGGCTCAGTAAAGATTCAGTTGTAGTTATAGAAGCTTCCAAAGAGATCGTTGTAAAGGGGAGTTCTGGGGTAAAAAGCATCTATAAGCAATCTATACTGAGCTCATCCACCGAACCAGAACAGGAACACGTAAAAAATAAACTTGAAAATCAGGGTGCTGGTAATATTCCAAGATACTTGAATCTTGAACCGTCACTTGCAATGGACTGGCTTGAGATACCATGGGACGATTTACGAATCAAAGAGCGTGTTGGTGCTGGATCATTTGGGACAGTGTATCGTGCTGAATGGCATGGATCGGATGTTGCTGTCAAGGTTTTAACAGTTCAGGATTTCCAGGATGATCAGTTGAAAGAATTTCTGAGAGAGGTTGCCATAATGAAACGAGTTCGTCATCCAAATGTGGTGCTTTTCATGGGTGCGGTTACTAAACGTCCACATCTATCTATAGTAACAGAATATTTGCCTAGGGGCAGTTTATTCCGCCTAATTCATAAGCCAGCATCTGGTGAAATTCTAGATCCTAGGAGAAGGTTACGAATGGCTTTAGACGTGGCTAAAGGGATAAATTATCTCCACTGTTTGAAGCCTCCAATTGTGCACTGGGATCTGAAAACCCCGAACTTGTTAGTGGACAGAAATTGGACTGTCAAGGTGTGTGATTTTGGATTGTCCAGATTTAAGGCGAACACTTTCTTGTCATCAAAATCTGTTGCTGGAACTCCCGAGTGGATGGCTCCAGAATTTCTTCGTGGAGAACCTTCAAATGAGAAGTCTGATGTTTACAGTTTTGGAGTTATCCTGTGGGAACTTGTGACCCTGCAACAACCGTGGAATGGACTTAGCCATGCCCAGGTAGTTGGAGCTGTCGCCTTCCAGAATAGGAGGCTTGCTATCCCTCCAAACATTTCCCCAGCGTTGGCCTCTCTCATGGAAGCTTGTTGGGCTGATAAACCTGGTGATCGGCCATCATTTGGAAGCATAGTTGAATCTCTAAAGAAGCTACTGAAGTCACCCGCTGATGCGATTAAAATGGGAGGGAAATAA 2736 0.4675 MPHRATYFFPRQFPERGLDESSKQRLDHEKRKLVNSIKSSDTTFAYESDAPKKPTPIPTPAAKDNDDVVFSSGKQSAVSDLFTGADKFRTKQKQIAAFCDWLIDKKKDINRPSHRLRTYPNDEEEEEDERELLLPPPPPPASAAAQVVKDAVDRSFDRQVSLPRLSSGSSYAGSLFTLDGTATFSSDVTKDETSSFQVFTEEDARKRKEEEENVKLNTAQKYKESYYLQLTLAQRLSFLASLASEPVLALDAGPETWDAESVSYRLWVSGCLSYTDKISDGFYNILGMNPYLWVMCNDVEEEGKRLPTLMALKAVEPSETSIEVVFFDRQEDSRLKQLQDKAQELYSASENALVLVEKLGKLVAICMGGTFPVEQGDLHKRWKLVSKRLRNFHQCVVLPVGSLSSGLCRHRAILFKRLADYIGLPCRIARGCRYCVSDHRSSCLVKIKDDRQLSREYVVDLVGEPGNILGPDSSINGAYASSIPSPFQISHLKESQSPYVDATACSQSLDNTYSGFVQEDQRVDETDRQKNNNGSIYSAIDQTRGGVSEDLDEVSGAPIHEYPRLSKDSVVVIEASKEIVVKGSSGVKSIYKQSILSSSTEPEQEHVKNKLENQGAGNIPRYLNLEPSLAMDWLEIPWDDLRIKERVGAGSFGTVYRAEWHGSDVAVKVLTVQDFQDDQLKEFLREVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLPRGSLFRLIHKPASGEILDPRRRLRMALDVAKGINYLHCLKPPIVHWDLKTPNLLVDRNWTVKVCDFGLSRFKANTFLSSKSVAGTPEWMAPEFLRGEPSNEKSDVYSFGVILWELVTLQQPWNGLSHAQVVGAVAFQNRRLAIPPNISPALASLMEACWADKPGDRPSFGSIVESLKKLLKSPADAIKMGGK 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01629 911 MobiDBLite consensus disorder prediction 37 68 - -
Viun8g01629 911 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 196 900 - -
Viun8g01629 911 MobiDBLite consensus disorder prediction 112 142 - -
Viun8g01629 911 CDD STKc_MAP3K-like 647 895 - -
Viun8g01629 911 SMART serkin_6 641 899 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g01629 911 ProSitePatterns Protein kinases ATP-binding region signature. 647 668 IPR017441 GO:0005524
Viun8g01629 911 Pfam Protein tyrosine and serine/threonine kinase 641 895 IPR001245 GO:0004672|GO:0006468
Viun8g01629 911 Gene3D Phosphorylase Kinase; domain 1 634 718 - -
Viun8g01629 911 Gene3D Transferase(Phosphotransferase) domain 1 720 907 - -
Viun8g01629 911 ProSitePatterns Serine/Threonine protein kinases active-site signature. 762 774 IPR008271 GO:0004672|GO:0006468
Viun8g01629 911 FunFam Serine/threonine-protein kinase CTR1 720 905 - -
Viun8g01629 911 FunFam Serine/threonine-protein kinase isoform 1 631 719 - -
Viun8g01629 911 PRINTS Tyrosine kinase catalytic domain signature 822 844 IPR001245 GO:0004672|GO:0006468
Viun8g01629 911 PRINTS Tyrosine kinase catalytic domain signature 756 774 IPR001245 GO:0004672|GO:0006468
Viun8g01629 911 PRINTS Tyrosine kinase catalytic domain signature 715 728 IPR001245 GO:0004672|GO:0006468
Viun8g01629 911 PRINTS Tyrosine kinase catalytic domain signature 866 888 IPR001245 GO:0004672|GO:0006468
Viun8g01629 911 SUPERFAMILY Protein kinase-like (PK-like) 620 894 IPR011009 -
Viun8g01629 911 Pfam Ethylene-responsive protein kinase Le-CTR1 259 468 - -
Viun8g01629 911 ProSiteProfiles Protein kinase domain profile. 641 899 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01629 Viun-Chr8 27188702 27205190 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01629 1 910 MAP Kinase Kinase Kinase AT4G24480 58.368 0.0 1048
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Viun8g01629 PK_Tyr_Ser-Thr 4.9e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01629 - - gmx:100786546 1567.75