Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01628 ATGCCTCACAGAGCGACTTACTTTTTCCCGAGGCAGTTCCCGGAGAGGGGTTTGGATGAGTCTTCCAAGCAGAGATTGGATCATGAAAAGAGAAAACTCGTCAACTCTATCAAATCATCTGATACGACTTTTGCATATGAAAGCGACGCGCCGAAAAAGCCAACACCGATTCCCACGCCTGCTGCTAAAGACAACGACGACGTCGTTTTCTCATCCGGTAAGCAATCCGCAGTCTCCGACCTATTCACCGGTGCCGACAAGTTCCGCACCAAGCAGAAGCAAATCGCCGCCTTCTGCGATTGGTTGATCGACAAAAAGAAGGACATCAACCGACCTAGTCACCGTTTAAGGACCTATCCGAACGACGAGGAGGAGGAAGAAGATGAACGTGAGCTTCTGCTTCCACCGCCGCCGCCGCCTGCGTCGGCGGCCGCGCAGGTGGTGAAGGATGCTGTTGACCGGAGCTTCGATCGGCAGGTTTCTCTCCCGCGGTTGTCCAGCGGGAGCAGCTACGCCGGAAGCTTGTTCACGCTGGACGGCACCGCCACATTCTCCAGCGACGTTACGAAAGACGAAACGTCGTCGTTTCAAGTCTTTACTGAAGAAGACGCGAGAAAAAGGAAAGAAGAGGAAGAAAACGTAAAACTCAATACGGCTCAGAAGTATAAGGAGAGCTACTACCTGCAACTGACGTTGGCGCAGAGACTCTCTTTTTTAGCAAGCCTCGCTTCTGAACCTGTTCTCGCACTCGACGCTGGTCCCGAAACCTGGGACGCTGAATCCGTTTCGTATCGTTTATGGGTGAGTGGATGTTTGTCGTACACGGACAAGATATCTGACGGATTTTACAACATACTGGGGATGAATCCATACCTGTGGGTGATGTGCAATGATGTTGAGGAAGAAGGGAAGCGTTTACCGACGCTGATGGCGCTTAAGGCGGTTGAACCTAGCGAGACTTCCATAGAGGTAGTTTTTTTCGATAGACAAGAGGACTCTCGGCTTAAGCAGCTTCAAGATAAAGCTCAGGAGTTGTATTCTGCTTCGGAGAACGCGTTGGTGCTGGTGGAGAAACTCGGAAAACTCGTTGCCATATGCATGGGGGGTACGTTTCCTGTGGAGCAAGGAGATCTACACAAGCGGTGGAAGTTGGTTAGCAAGAGGTTGAGGAACTTTCACCAATGTGTTGTGCTTCCTGTTGGTAGCTTATCCAGTGGACTCTGTAGGCATCGCGCGATTCTCTTCAAGAGATTGGCAGATTACATTGGTTTGCCATGCCGCATTGCCCGAGGTTGTAGATACTGTGTTTCAGATCATAGATCGTCCTGCCTTGTCAAGATTAAAGATGACAGACAGCTCTCAAGAGAATATGTAGTTGATCTGGTTGGAGAACCAGGAAATATCCTTGGGCCAGATTCCTCAATTAACGGAGCATATGCGTCATCAATACCTTCCCCATTTCAAATTTCTCATTTGAAAGAATCCCAATCTCCATATGTGGATGCTACAGCATGTTCTCAATCTCTTGATAACACTTATTCAGGCTTTGTACAAGAAGATCAACGAGTTGACGAAACTGATCGACAGAAAAATAATAATGGCTCTATTTATTCTGCAATAGATCAAACTCGTGGAGGTACAGAACAACCTCTATTTCCTTGTGGCTTGAAAGGGAATGATAAGGAATGTGCTGTTCTGGGTTTATTAAATTTTCCTCCCATCTATGAAGGTGTTTCTGAAGATCTCGACGAAGTCTCTGGAGCACCAATCCATGAATACCCTAGGCTCAGTAAAGATTCAGTTGTAGTTATAGAAGCTTCCAAAGAGATCGTTGTAAAGGGGAGTTCTGGGGTAAAAAGCATCTATAAGCAATCTATACTGAGCTCATCCACCGAACCAGAACAGGAACACGTAAAAAATAAACTTGAAAATCAGGGTGCTGGTAATATTCCAAGATACTTGAATCTTGAACCGTCACTTGCAATGGACTGGCTTGAGATACCATGGGACGATTTACGAATCAAAGAGCGTGTTGGTGCTGGATCATTTGGGACAGTGTATCGTGCTGAATGGCATGGATCGGATGTTGCTGTCAAGGTTTTAACAGTTCAGGATTTCCAGGATGATCAGTTGAAAGAATTTCTGAGAGAGGTTGCCATAATGAAACGAGTTCGTCATCCAAATGTGGTGCTTTTCATGGGTGCGGTTACTAAACGTCCACATCTATCTATAGTAACAGAATATTTGCCTAGGGGCAGTTTATTCCGCCTAATTCATAAGCCAGCATCTGGTGAAATTCTAGATCCTAGGAGAAGGTTACGAATGGCTTTAGACGTGGCTAAAGGGATAAATTATCTCCACTGTTTGAAGCCTCCAATTGTGCACTGGGATCTGAAAACCCCGAACTTGTTAGTGGACAGAAATTGGACTGTCAAGGTGTGTGATTTTGGATTGTCCAGATTTAAGGCGAACACTTTCTTGTCATCAAAATCTGTTGCTGGAACTCCCGAGTGGATGGCTCCAGAATTTCTTCGTGGAGAACCTTCAAATGAGAAGTCTGATGTTTACAGTTTTGGAGTTATCCTGTGGGAACTTGTGACCCTGCAACAACCGTGGAATGGACTTAGCCATGCCCAGGTAGTTGGAGCTGTCGCCTTCCAGAATAGGAGGCTTGCTATCCCTCCAAACATTTCCCCAGCGTTGGCCTCTCTCATGGAAGCTTGTTGGGCTGATAAACCTGGTGATCGGCCATCATTTGGAAGCATAGTTGAATCTCTAAAGAAGCTACTGAAGTCACCCGCTGATGCGATTAAAATGGGAGGGAAATAA 2829 0.4648 MPHRATYFFPRQFPERGLDESSKQRLDHEKRKLVNSIKSSDTTFAYESDAPKKPTPIPTPAAKDNDDVVFSSGKQSAVSDLFTGADKFRTKQKQIAAFCDWLIDKKKDINRPSHRLRTYPNDEEEEEDERELLLPPPPPPASAAAQVVKDAVDRSFDRQVSLPRLSSGSSYAGSLFTLDGTATFSSDVTKDETSSFQVFTEEDARKRKEEEENVKLNTAQKYKESYYLQLTLAQRLSFLASLASEPVLALDAGPETWDAESVSYRLWVSGCLSYTDKISDGFYNILGMNPYLWVMCNDVEEEGKRLPTLMALKAVEPSETSIEVVFFDRQEDSRLKQLQDKAQELYSASENALVLVEKLGKLVAICMGGTFPVEQGDLHKRWKLVSKRLRNFHQCVVLPVGSLSSGLCRHRAILFKRLADYIGLPCRIARGCRYCVSDHRSSCLVKIKDDRQLSREYVVDLVGEPGNILGPDSSINGAYASSIPSPFQISHLKESQSPYVDATACSQSLDNTYSGFVQEDQRVDETDRQKNNNGSIYSAIDQTRGGTEQPLFPCGLKGNDKECAVLGLLNFPPIYEGVSEDLDEVSGAPIHEYPRLSKDSVVVIEASKEIVVKGSSGVKSIYKQSILSSSTEPEQEHVKNKLENQGAGNIPRYLNLEPSLAMDWLEIPWDDLRIKERVGAGSFGTVYRAEWHGSDVAVKVLTVQDFQDDQLKEFLREVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLPRGSLFRLIHKPASGEILDPRRRLRMALDVAKGINYLHCLKPPIVHWDLKTPNLLVDRNWTVKVCDFGLSRFKANTFLSSKSVAGTPEWMAPEFLRGEPSNEKSDVYSFGVILWELVTLQQPWNGLSHAQVVGAVAFQNRRLAIPPNISPALASLMEACWADKPGDRPSFGSIVESLKKLLKSPADAIKMGGK 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01628 942 MobiDBLite consensus disorder prediction 37 68 - -
Viun8g01628 942 ProSiteProfiles Protein kinase domain profile. 672 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g01628 942 SUPERFAMILY Protein kinase-like (PK-like) 651 925 IPR011009 -
Viun8g01628 942 MobiDBLite consensus disorder prediction 112 142 - -
Viun8g01628 942 SMART serkin_6 672 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g01628 942 PRINTS Tyrosine kinase catalytic domain signature 787 805 IPR001245 GO:0004672|GO:0006468
Viun8g01628 942 PRINTS Tyrosine kinase catalytic domain signature 746 759 IPR001245 GO:0004672|GO:0006468
Viun8g01628 942 PRINTS Tyrosine kinase catalytic domain signature 897 919 IPR001245 GO:0004672|GO:0006468
Viun8g01628 942 PRINTS Tyrosine kinase catalytic domain signature 853 875 IPR001245 GO:0004672|GO:0006468
Viun8g01628 942 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 196 931 - -
Viun8g01628 942 Pfam Ethylene-responsive protein kinase Le-CTR1 259 468 - -
Viun8g01628 942 FunFam Serine/threonine-protein kinase CTR1 751 936 - -
Viun8g01628 942 CDD STKc_MAP3K-like 678 926 - -
Viun8g01628 942 Gene3D Transferase(Phosphotransferase) domain 1 751 938 - -
Viun8g01628 942 Gene3D Phosphorylase Kinase; domain 1 665 749 - -
Viun8g01628 942 ProSitePatterns Serine/Threonine protein kinases active-site signature. 793 805 IPR008271 GO:0004672|GO:0006468
Viun8g01628 942 Pfam Protein tyrosine and serine/threonine kinase 672 926 IPR001245 GO:0004672|GO:0006468
Viun8g01628 942 ProSitePatterns Protein kinases ATP-binding region signature. 678 699 IPR017441 GO:0005524
Viun8g01628 942 FunFam Serine/threonine-protein kinase isoform 1 662 750 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01628 Viun-Chr8 27188702 27205192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01628 1 941 MAP Kinase Kinase Kinase AT4G24480 57.215 0.0 1040
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Viun8g01628 PK_Tyr_Ser-Thr 5.2e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01628 - - gmx:100786546 1636.7