Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01618 ATGAAAGTTTCAGTCTTCTTTATTTGCATTATTGCTTTGGTGGTTTGTGTAGTTGGGTGCTTTTACATTCCTATTTTCATCACACAACTGTTGGAAAAATGGGAAATTTGTAAAGGTTTTCTTCTTGATCCTGCAAAATGGGGTGTGCTGAGTTTGCCGGAAAAGCAAAGACTAGTCCATGAGATTGCGCGACAGTCGAAAGATGCCTCTAGTATGCTTCAGACATTTACACGCCGGGAACTTCTAGAAATAATCTGTGCTGAATTAGGCAAAGAGAGGAAGTACACAGGCTATACTAAGAGTCAAATGATAGAACATCTTCTGAAGATAATTTCTAAGAACTCTAACTTGCACATAACCGGAAATATGCCAGCTACTACCAAAAGTTGCATTGGATCTAAAAGGAAAAAGAAACCTGCATCTGAGGATTTACACCATGCTCCTCTAGAGGACATCAAAGAGGAAATAGTGAAAACCTTTTTGTGTCAAAATGTCGCATGCAAAGCTACATTGAATCCAGAAGACTCTTTTTGCAAGAGATGTTCTTGTTGCATATGTCATTGCTATGATGATAACAAGGATCCTAGTTTGTGGTTGACCTGCAGCTCTGATCTTCCCAATGAGGAGTCATGTGGAATGTCCTGTCATTTGCAATGTGCTTTGAGCAATCAAATGTCTGGCATTTTGAAGGGTAGTTGTGGTATTAAGTTAGATGGAGCCTTCTGTTGTGTTTCTTGTGGAAAAAGTAATGAACTGATGAAGACATGGAGAAAGCAATTATTGGTTGCCAAAGAAGCAAGAAGAATGGATATACTGTCTTTGCGAATATCCCTGGCTCACAGAATTCTTGTAGGAACAGAAATGTACAAGGAACTGCAAAAGATTGTAGAAACTGCTCTCAAATTACTGGAGAATGAAGTGGGATCACTTGATCATGTATATGCGAGGATGACGCGTGGAATTGTAAGCCGGCTTTCATGCGGTGCTGAGGTTCAGAGATTGTGCTCAACTGCAATTGAATGTTTTGATTCAAAATTTTCTGACCTTTTCTCTGTTTCTGTGGTAAAGAAAGATGCACCAACATGTTCAATTCGTTTTGAAGAGTGTCTTCCTAGTTCAGTGGTTATCGTGGTAGAGTACAACGACAAACTTTTAAAGAACTTTCTAGGGTGCAGGCTTTGGCACCGAGTATCAACTACAGACTACCCTGAACAACCCACCTTCATCGTCTTGAGGCCGGAGAAAAGATTCAAGTTAGAAAACCTGCACCCTTCAACCGTGTACTTTTGCAAGGCTTCTCTGTTCAGCAGCACAGGGATTTTGGGTGCTGCAGAAGCTAAATGGGTGACCCAGTGTGAGCCCACCAATTCTGCAAGACGAACAAGTTGTGCCGGAAATCGTTTTACAATGGAAATGTGTGGTCAGGATCATCCCACAGAATCTGGCATCTCCGACATGAAGTTATCATCTCGACAACATCCTGGGAAACCCATCAGTTTGAACATCAGAGGCAGGTTTGAAGAGTTCCTCTCAAAGCCTCAGTCTTTAGAGCCTTTTTCGTATAAAAATCTTGCTGCTGCAGTTTCACCTTCCACACCTTGTAAATCCTATGAGATGAGGCAAATTCCTGGGTTGAATGCTAGAAAACGGTCGAAGGAAAATGACTACGAGTATTCTGTGAGGGTGGTGAAATGGTTGGAGCATCTGGGGCACATAGATGAAATCTTCAGAGTGAGATTTCTGACTTGGTTCAGCCTTAAGGCTACTCAACAGGAGAGAAGGGTGGTTAGTGCTTTTGTTGATGCATTGATTGATGACCCAGCAAGCTTAGCGGATCAGCTCATACACACTTTCAGTGATGAAATATGTTGCGAGCAAAAACCCTTGTGA 1890 0.4175 MKVSVFFICIIALVVCVVGCFYIPIFITQLLEKWEICKGFLLDPAKWGVLSLPEKQRLVHEIARQSKDASSMLQTFTRRELLEIICAELGKERKYTGYTKSQMIEHLLKIISKNSNLHITGNMPATTKSCIGSKRKKKPASEDLHHAPLEDIKEEIVKTFLCQNVACKATLNPEDSFCKRCSCCICHCYDDNKDPSLWLTCSSDLPNEESCGMSCHLQCALSNQMSGILKGSCGIKLDGAFCCVSCGKSNELMKTWRKQLLVAKEARRMDILSLRISLAHRILVGTEMYKELQKIVETALKLLENEVGSLDHVYARMTRGIVSRLSCGAEVQRLCSTAIECFDSKFSDLFSVSVVKKDAPTCSIRFEECLPSSVVIVVEYNDKLLKNFLGCRLWHRVSTTDYPEQPTFIVLRPEKRFKLENLHPSTVYFCKASLFSSTGILGAAEAKWVTQCEPTNSARRTSCAGNRFTMEMCGQDHPTESGISDMKLSSRQHPGKPISLNIRGRFEEFLSKPQSLEPFSYKNLAAAVSPSTPCKSYEMRQIPGLNARKRSKENDYEYSVRVVKWLEHLGHIDEIFRVRFLTWFSLKATQQERRVVSAFVDALIDDPASLADQLIHTFSDEICCEQKPL 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01618 629 Pfam PHD - plant homeodomain finger protein 162 281 IPR032881 -
Viun8g01618 629 PANTHER VIN3-LIKE PROTEIN 2-RELATED 40 477 IPR044514 GO:0010048|GO:0040029
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01618 Viun-Chr8 27164116 27167811 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01618 42 622 PHD Gene Family AT5G57380 34.603 5.93e-103 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01618 - - gmx:100785502 1038.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g01618 8 27164116 27167811 Viun8g01618 8 27164116 27167811 ECH