Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01617 ATGAGCGAAGAAGAGACCAAGGGTTCTGCTTTTCTGGGAGCCAACACCTCTTATTCAGGTTTTCTTCTTGATCCTGCAAAATGGGGTGTGCTGAGTTTGCCGGAAAAGCAAAGACTAGTCCATGAGATTGCGCGACAGTCGAAAGATGCCTCTAGTATGCTTCAGACATTTACACGCCGGGAACTTCTAGAAATAATCTGTGCTGAATTAGGCAAAGAGAGGAAGTACACAGGCTATACTAAGAGTCAAATGATAGAACATCTTCTGAAGATAATTTCTAAGAACTCTAACTTGCACATAACCGGAAATATGCCAGCTACTACCAAAAGTTGCATTGGATCTAAAAGGAAAAAGAAACCTGCATCTGAGGATTTACACCATGCTCCTCTAGAGGACATCAAAGAGGAAATAGTGAAAACCTTTTTGTGTCAAAATGTCGCATGCAAAGCTACATTGAATCCAGAAGACTCTTTTTGCAAGAGATGTTCTTGTTGCATATGTCATTGCTATGATGATAACAAGGATCCTAGTTTGTGGTTGACCTGCAGCTCTGATCTTCCCAATGAGGAGTCATGTGGAATGTCCTGTCATTTGCAATGTGCTTTGAGCAATCAAATGTCTGGCATTTTGAAGGGTAGTTGTGGTATTAAGTTAGATGGAGCCTTCTGTTGTGTTTCTTGTGGAAAAAGTAATGAACTGATGAAGACATGGAGAAAGCAATTATTGGTTGCCAAAGAAGCAAGAAGAATGGATATACTGTCTTTGCGAATATCCCTGGCTCACAGAATTCTTGTAGGAACAGAAATGTACAAGGAACTGCAAAAGATTGTAGAAACTGCTCTCAAATTACTGGAGAATGAAGTGGGATCACTTGATCATGTATATGCGAGGATGACGCGTGGAATTGTAAGCCGGCTTTCATGCGGTGCTGAGGTTCAGAGATTGTGCTCAACTGCAATTGAATGTTTTGATTCAAAATTTTCTGACCTTTTCTCTGTTTCTGTGGTAAAGAAAGATGCACCAACATGTTCAATTCGTTTTGAAGAGTGTCTTCCTAGTTCAGTGGTTATCGTGGTAGAGTACAACGACAAACTTTTAAAGAACTTTCTAGGGTGCAGGCTTTGGCACCGAGTATCAACTACAGACTACCCTGAACAACCCACCTTCATCGTCTTGAGGCCGGAGAAAAGATTCAAGTTAGAAAACCTGCACCCTTCAACCGTGTACTTTTGCAAGGCTTCTCTGTTCAGCAGCACAGGGATTTTGGGTGCTGCAGAAGCTAAATGGGTGACCCAGTGTGAGCCCACCAATTCTGCAAGACGAACAAGTTGTGCCGGAAATCGTTTTACAATGGAAATGTGTGGTCAGGATCATCCCACAGAATCTGGCATCTCCGACATGAAGTTATCATCTCGACAACATCCTGGGAAACCCATCAGTTTGAACATCAGAGGCAGGTTTGAAGAGTTCCTCTCAAAGCCTCAGTCTTTAGAGCCTTTTTCGTATAAAAATCTTGCTGCTGCAGTTTCACCTTCCACACCTTGTAAATCCTATGAGATGAGGCAAATTCCTGGGTTGAATGCTAGAAAACGGTCGAAGGAAAATGACTACGAGTATTCTGTGAGGGTGGTGAAATGGTTGGAGCATCTGGGGCACATAGATGAAATCTTCAGAGTGAGATTTCTGACTTGGTTCAGCCTTAAGGCTACTCAACAGGAGAGAAGGGTGGTTAGTGCTTTTGTTGATGCATTGATTGATGACCCAGCAAGCTTAGCGGATCAGCTCATACACACTTTCAGTGATGAAATATGTTGCGAGCAAAAACCCTTGTGA 1833 0.425 MSEEETKGSAFLGANTSYSGFLLDPAKWGVLSLPEKQRLVHEIARQSKDASSMLQTFTRRELLEIICAELGKERKYTGYTKSQMIEHLLKIISKNSNLHITGNMPATTKSCIGSKRKKKPASEDLHHAPLEDIKEEIVKTFLCQNVACKATLNPEDSFCKRCSCCICHCYDDNKDPSLWLTCSSDLPNEESCGMSCHLQCALSNQMSGILKGSCGIKLDGAFCCVSCGKSNELMKTWRKQLLVAKEARRMDILSLRISLAHRILVGTEMYKELQKIVETALKLLENEVGSLDHVYARMTRGIVSRLSCGAEVQRLCSTAIECFDSKFSDLFSVSVVKKDAPTCSIRFEECLPSSVVIVVEYNDKLLKNFLGCRLWHRVSTTDYPEQPTFIVLRPEKRFKLENLHPSTVYFCKASLFSSTGILGAAEAKWVTQCEPTNSARRTSCAGNRFTMEMCGQDHPTESGISDMKLSSRQHPGKPISLNIRGRFEEFLSKPQSLEPFSYKNLAAAVSPSTPCKSYEMRQIPGLNARKRSKENDYEYSVRVVKWLEHLGHIDEIFRVRFLTWFSLKATQQERRVVSAFVDALIDDPASLADQLIHTFSDEICCEQKPL 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01617 610 CDD PHD_VIN3_plant 163 227 - -
Viun8g01617 610 PANTHER VIN3-LIKE PROTEIN 2-RELATED 21 459 IPR044514 GO:0010048|GO:0040029
Viun8g01617 610 Pfam PHD - plant homeodomain finger protein 143 262 IPR032881 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01617 Viun-Chr8 27163749 27167811 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01617 23 603 PHD Gene Family AT5G57380 34.603 2.00e-103 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01617 - - gmx:100785502 1066.22